Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_3076 |
Symbol | |
ID | 3580076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 3598495 |
End bp | 3599487 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637686813 |
Product | phytoene synthase |
Protein accession | YP_291132 |
Protein GI | 72163475 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.270581 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGCGGG AACTGCGGGC CGCGGGCATC ACCGACCCCC AGCTGTGCGC GGCCTACCTG CACTGCCGGA CGCTGCACGC CCACCACGGG CGCACCTACT ATCTGGCCAC GCTCACCCTC CCCCCGCAGC GGAGGCCCGC GATCCACGCC CTCTACGGCT TCGCGCGCTG GGTGGACGAC GTCATCGACG CGCCACGCAC CGCCCTCCCC GTGGAGGCGC GGGCTGCCCT GCTGTCCGAA GTCGGCACCG AGCTGACCGC TGCCCTGGCG GGGGGAGAGG ACGTCCACCC GGTGGTGCGC GCTGTGGCGG ACACCGCGCG GCGGTACGAG ATCGGCGCCG AACTGTTCAC GGCGTTCCTG CGGTCCATGC GGATGGACCT GTCCACCACC GACTATGCGA GCTTCGAAGA CCTGCGCGGC TACATGTACG GCTCGGCCGC GGTGATCGGG CTCCAAGTGC TGCCGGTGCT CGGCACCGTG GTCCCGCTGC CGCGGGCTGC CCCGCATGCG GCAGCGCTCG GCGAGGCGTT CCAGTTGACC AACTTCCTGC GGGATGTGGC TGAAGACCTG GACCGGGGGC GGGTCTACCT GCCCGCGGAC ATCCTGGCCC GCTACGGGGT GGACCGGGAC CTGCTGTTGT GGTGCCGTGC TCACCGGCGC GGGCATCCGC GGGTGCGGGA CGCGCTCGCC CACCTGGTGG CGTTGAACCG GGAGATCTAC CGGACGGCTG CCCCGGGCAT CGCGATGCTC GACCCGGTGT CGCGTCCCTG CGTCGCTACT GCGTTCACCC TGTACCAGGG GATTCTCGAC GTCATCGAAG CATCCGGCTT CGACGTGTGG AGCGGTCGGT GCACCGTGCC GCAGTGGCGG CGCGTGCAGG TAGCGGTTCC CGCCTTCGCC CGGGCCATGC TGCGCCGGGC GGTGTCGGGA CGCCGGGCGA ACAGTGGGGT GGCGCCGCGG ATGAGCGGCG CTCGGAGTTA CGGGGGGAAT TGA
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Protein sequence | MKRELRAAGI TDPQLCAAYL HCRTLHAHHG RTYYLATLTL PPQRRPAIHA LYGFARWVDD VIDAPRTALP VEARAALLSE VGTELTAALA GGEDVHPVVR AVADTARRYE IGAELFTAFL RSMRMDLSTT DYASFEDLRG YMYGSAAVIG LQVLPVLGTV VPLPRAAPHA AALGEAFQLT NFLRDVAEDL DRGRVYLPAD ILARYGVDRD LLLWCRAHRR GHPRVRDALA HLVALNREIY RTAAPGIAML DPVSRPCVAT AFTLYQGILD VIEASGFDVW SGRCTVPQWR RVQVAVPAFA RAMLRRAVSG RRANSGVAPR MSGARSYGGN
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