Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_3069 |
Symbol | |
ID | 3580045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 3585883 |
End bp | 3586407 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637686802 |
Product | peptidylprolyl isomerase |
Protein accession | YP_291125 |
Protein GI | 72163468 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.00667109 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCGACA CCAAGGAGCT CTTCGCTCGG CTGAACACCA CCAAGGGCAC GATTGTCGTC AGGCTCTTCC CCGACAAGGC GCCGGAGACG GTGGCGAACT TCGTCGGGCT CGCCGAGGGA ACCAAACAGT GGGTGGACCC CCGCACGGGA CGGCCGACGA CGAGCAAGCT CTACGACGGC ACGGTGTTTC ACCGGGTCAT CAAGGACTTC ATGATCCAGG GCGGCGACCC GCTGGGTAAT GGACGCGGTG GCCCCGGATA CAAGTTCAAC GATGAGATCC ACCCGTCGTT GAAGTTCGAC CGCCCTTACC TGCTGGCGAT GGCGAACGCC GGCCCGAACA GCAACGGCTC CCAGTTCTTC ATCACTGTGA CGCCCACCGA CTGGCTCAAC GGCCGTCACA CGATCTTCGG TGAGGTTGTC GAAGGCAGTG AGGTGGCTGT GGCGATCTCC GAGGTCGCCA CCGACCAGAT GGACAAGCCT TTGGAGCCGG TCGTCCTCGA GTCCGTCACG ATCGAACGTA GGTAG
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Protein sequence | MSDTKELFAR LNTTKGTIVV RLFPDKAPET VANFVGLAEG TKQWVDPRTG RPTTSKLYDG TVFHRVIKDF MIQGGDPLGN GRGGPGYKFN DEIHPSLKFD RPYLLAMANA GPNSNGSQFF ITVTPTDWLN GRHTIFGEVV EGSEVAVAIS EVATDQMDKP LEPVVLESVT IERR
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