Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2875 |
Symbol | |
ID | 3581780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 3384693 |
End bp | 3385568 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637686604 |
Product | HhH-GPD:Iron-sulfur cluster loop |
Protein accession | YP_290931 |
Protein GI | 72163274 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1194] A/G-specific DNA glycosylase |
TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.738957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAA ACCCCTACCG TACAGCCGTT CTCGCCTGGT ATGACGCCAA CGCACGGGAT CTCCCGTGGC GCTCCGCGGA GGTGACCCCG TGGGGTGTGC TGGTGAGCGA GGTGATGCTC CAGCAGACCC CGGTGGCGCG GGTGCTGCCC GCCTGGCAGG CGTGGATGGA ACGCTGGCCT ACCCCGAAGG ACCTGGCGGC CGATTCTGCG GGGGAAGCCG TGCGGATGTG GGGGCGGCTC GGCTATCCGC GTCGTGCGCT GCGGTTGCAC GCGTGTGCGA CGGTGATCGT GGAGCGGCAC GGCGGCACAG TGCCGGACTC GTACGACGAA CTGTTGGCGC TGCCCGGGGT GGGGGCATAC ACGGCGGCCG CGGTGGCGAG TTTCGCGTTC CAGCAGCGGC ATGCGGTGTT GGACACGAAC GTGCGGCGTG TCTTGGAGCG GCTGGTGAAC GGGCGGCAGT ATCCGCCGCG AACCCCCACG AAAGCCGAGT ACCGGCTGGC GGAGTCGTTG CTTCCGGAGG AGCCCGCGGT AGCGGCTCGG TGGGGGGTCG CGGTGATGGA GCTGGGTGCG CTGGTGTGTA CGGCGCGGTC GCCCCGCTGC GGGGTGTGCC CGGTGGTGGA CCAGTGCGCG TGGGTGCTCG CGGGGTGTCC CCCGCATGAC GGGCCGCCGC GGCGCGGCCA GCGGTATGCG GGGACGGACC GCCAGGTCCG CGGCCGGCTG TTGGCGGTGC TGCGGGAAGC GTCCGGTCCG GTGCCGAAGT CGATGTTGGA CGCGGTGTGG GATGACGCGG TCCAGCGGGA ACGGGCGTTG GACAGTCTGG TGGCTGACGG TCTGGTGGAC CCGTTGGAGA CGGGCGAGTA CGCGCTGCCT AACTGA
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Protein sequence | MTANPYRTAV LAWYDANARD LPWRSAEVTP WGVLVSEVML QQTPVARVLP AWQAWMERWP TPKDLAADSA GEAVRMWGRL GYPRRALRLH ACATVIVERH GGTVPDSYDE LLALPGVGAY TAAAVASFAF QQRHAVLDTN VRRVLERLVN GRQYPPRTPT KAEYRLAESL LPEEPAVAAR WGVAVMELGA LVCTARSPRC GVCPVVDQCA WVLAGCPPHD GPPRRGQRYA GTDRQVRGRL LAVLREASGP VPKSMLDAVW DDAVQRERAL DSLVADGLVD PLETGEYALP N
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