| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2645 |
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| Symbol | rplD |
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| ID | 3581461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3107271 |
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| End bp | 3107939 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637686364 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_290701 |
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| Protein GI | 72163044 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.264538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGACCA TCGAGGTCAA GGACCGCGAG GGCGCGGCGA AGGGAAGCGT CGAGCTCCCT
GACGAGATCT TCGCGCAGAA GGTCAACATC CCGCTGATCC ACCAGGTCGT GGTCGCCCAG
CAGGCCGCAG GCCGGCAGGG GACGCACTCC ACCAAGACCC GCGGTGAGGT CCGCGGTGGT
GGTAAGAAGC CGTACCGCCA GAAGGGCACC GGCCGGGCCC GCCAGGGTTC TGTCCGTGCG
CCCCAGTTCA CCGGCGGTGG TACGGTGCAC GGCCCCAAGC CGCGCGACTA CGCCCAGCGG
ACGCCCAAGA AGATGAAGGC TGCCGCCCTG CGCGGGGCGC TCAGCAACCG GGCGCAGCAC
GGACGTATCC ACGTCGTCAG CGAGTTCGTC CCCGAGGACG TCACCACCAA GCGCACCCAG
ACTGCGCTGA AGACGCTGCG TAAGATCACC GACTCTGACA AGGTGCTGGT GGTTCTGTCG
CGCGAAGACC AGCACAACCG TCTCGCGCTG CGGAACCTCC CCGAGGTGCA CATCCTCGAC
GCCAACCAGG TCAACACCTA CGACGTGCTC TACGCCGACG ACATCGTGTT CACCGAAGCC
GGTTACCAGG AGTTCCTGGC ACACGCCAAG GGCAGCAAGA TCGCGGCGTC TCAGGAGGAC
GACCAGTGA
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| Protein sequence | MATIEVKDRE GAAKGSVELP DEIFAQKVNI PLIHQVVVAQ QAAGRQGTHS TKTRGEVRGG
GKKPYRQKGT GRARQGSVRA PQFTGGGTVH GPKPRDYAQR TPKKMKAAAL RGALSNRAQH
GRIHVVSEFV PEDVTTKRTQ TALKTLRKIT DSDKVLVVLS REDQHNRLAL RNLPEVHILD
ANQVNTYDVL YADDIVFTEA GYQEFLAHAK GSKIAASQED DQ
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