Gene Tfu_2617 details

Gene Information

• Locus tag: Tfu_2617
• Symbol: rplQ
• ID: 3580631
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 3092117
• End bp: 3092635
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637686336
• Product: 50S ribosomal protein L17
• Protein accession: YP_290673
• Protein GI: 72163016
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0203] Ribosomal protein L17
• TIGRFAM ID: [TIGR00059] ribosomal protein L17

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTACGC CAACGAAAGG GCCTCGGCTG GGCGGAGGCC CGGCACACGA GCGGCTCATG 
CTGGCGAACC TGGCGACCGC CCTGTTCCGG CACGGTCGCA TCAAGACCAC GGAGGCCAAG 
GCCAAGCGTC TGCGCCCCTA CGCGGAGAAG CTGATCACGC TGGGGAAGCG CGGTGACCTG 
CACGCTCGCC GCCAGGTCCT GACCAAGATC CGGGACAAGG CGGTTGTGCA CGAGCTGTTC 
ACCGAGATCG GCCCGCGCTA CGAGAACCGC AACGGCGGGT ACACGCGGAT CACCAAGATC 
GGCAACCGCA AGGGCGACAA CGCGCCGATG GCCGTGATCG AGCTGGTGGA AGCCCTGAAC 
AAGCCGGCGA CGGGCAGCAA GCGGGCGCAG ACCGAGGAAG CGGCGAGCCA GGAACCCGCC 
GCTGAGGCCG GCAAGCAGCC CGCGGAGGGC GCCACCTCGG TGCAGACCGC GGAGGCCGCC 
GACGCTTCTC AGGCTGAAGG GGAAGCGGAG GAGAAGTAA 

 

Protein sequence

MPTPTKGPRL GGGPAHERLM LANLATALFR HGRIKTTEAK AKRLRPYAEK LITLGKRGDL 
HARRQVLTKI RDKAVVHELF TEIGPRYENR NGGYTRITKI GNRKGDNAPM AVIELVEALN 
KPATGSKRAQ TEEAASQEPA AEAGKQPAEG ATSVQTAEAA DASQAEGEAE EK