| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2616 |
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| Symbol | truA |
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| ID | 3580630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3091194 |
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| End bp | 3092084 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637686335 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_290672 |
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| Protein GI | 72163015 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGGTT CCCGTCAGGG GGCCGGGCAT TTGTCGTGGA CGGAGACAGG AACAGTGACG
GACGAGACTC TGACCCGGCT GAGGTTAGAC ATTTCCTATG ACGGCACGGA CTTCTCCGGG
TGGGCGGAGC AGCCGGGAAG GCGCACCGTC CAAGGGGAGC TCCAGGCAGC ACTGGCCCGG
GTGCTGCGGA TCCCCACCCC CCAGTTGACC GTGGCGGGCC GCACGGATGC GGGAGTGCAC
GCCCGCGGCC AGGTGGCCCA CGTGGACGTG CCCGCGTCCG TGTGGGAGGC CGAGGGGGAG
CGGCTGCTGC GCCGCCTGGC CGGGGTGCTG CCTCCTGACG TCCGGGTGAC CGCGGTAGCC
CCGGCACCCC CGGGGTTCGA CGCCCGGTTT TCCGCGCTGT TCCGCCGCTA CGTTTACCGG
GTGAGCGATG CCCCGGGCGG GGTGGATCCG CTGCGCCGCC ACGAAGTCTT GTGGCACCGC
CGCCCCTTGG ACGTCGACCG GATGAACGAG GCTGCGGCCG CCCTGCTGGG CGAACACGAC
TTCGCCGCCT ACTGCCGGAA ACGGGAGGGA GCGTCCACGG TCCGGGAGCT CCAGCGTTTG
GAGTGGCGGC GGGAGAGCGA GCACGTGTAC GCGGCCACGG TGCAAGCGGA CGCGTTCTGC
CACAACATGG TGCGCGCCCT AGTGGGGGCG CTGCTCGCGG TGGGGGACGG CCGTCGTCCC
CCGGAGTGGC CTGCTCAAGT GCTCCGGGCC GGGGTACGCG ATTCGGCGGT GCACGTGGTG
CCGCCGCACG GCCTCACGTT GGAGGAGGTG CGCTACCCGG CGGATGAGGA GCTGGCCGCA
CGGGCCGCGG CGACCCGCAG GTTCCGGGTC TTGGAGCGGG CCGCAGAGTA G
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| Protein sequence | MPGSRQGAGH LSWTETGTVT DETLTRLRLD ISYDGTDFSG WAEQPGRRTV QGELQAALAR
VLRIPTPQLT VAGRTDAGVH ARGQVAHVDV PASVWEAEGE RLLRRLAGVL PPDVRVTAVA
PAPPGFDARF SALFRRYVYR VSDAPGGVDP LRRHEVLWHR RPLDVDRMNE AAAALLGEHD
FAAYCRKREG ASTVRELQRL EWRRESEHVY AATVQADAFC HNMVRALVGA LLAVGDGRRP
PEWPAQVLRA GVRDSAVHVV PPHGLTLEEV RYPADEELAA RAAATRRFRV LERAAE
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