| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2488 |
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| Symbol | |
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| ID | 3580747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2930197 |
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| End bp | 2930910 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637686204 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_290544 |
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| Protein GI | 72162887 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.271509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCTTGA GGACAACCGA GAGCGAGTGG GCGACGCCGC GCGCGGCCCT GTTCGACCTC
GACGGAACTC TCATCAACAG CGAACCGCGG AGTGTGGCGG TGTGGGCCAG GGTGCTCCAG
GACCGCGGGG TCGAACCGGA CGAGGCGCTG CTGTGCAAGT TCATGGGGCG GCGCGGCGAA
GACGTGATCA ACGAGCTCGC CCACCTGTTC CCGGGCGAGT CCGTGGAGGA CATCTTCGCT
GACCGCTGGC GCTACGGCCA GGATCCGGAC CTGCCCCCGG TGGAGCAGCT GCCCGAGTCC
GTGGCGTTTC TGAAGTACCT ACACGCCCAG GGAGTGCCGT TTGCGTTGGT GACCTCGGCC
GGGCGGCAGT GGGCAGAAAG CACCCTGGAA TGGCTGGGGG TCCGCGACAT GTTCCGCGGG
ATCATCTCTG CGGACGATGT CACGGTCGGC AAACCGCACC CTGAGGGGTA TCTCAGCGGA
GCCGAGCTTG TCGGCTACGG CCCCGAGCAC ATCGTGGTGT TCGAGGACAC CCCGGCGGGG
ATCATGGCGG GGCGCAACGC GGGGATGCGG GTCGTCGGAG TCACGACGAC GCATCCGCCG
CAGGCGCTGG CCCACGCCCA TCTCGTCGTG GAGCATCTGG GACAGGTGGG CTGGCCGCAG
TTGGTTTTGC GGGATCCGGA GCCGCCCCAG ACTGCTCTGG CAGGTCAAGG GTGA
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| Protein sequence | MGLRTTESEW ATPRAALFDL DGTLINSEPR SVAVWARVLQ DRGVEPDEAL LCKFMGRRGE
DVINELAHLF PGESVEDIFA DRWRYGQDPD LPPVEQLPES VAFLKYLHAQ GVPFALVTSA
GRQWAESTLE WLGVRDMFRG IISADDVTVG KPHPEGYLSG AELVGYGPEH IVVFEDTPAG
IMAGRNAGMR VVGVTTTHPP QALAHAHLVV EHLGQVGWPQ LVLRDPEPPQ TALAGQG
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