| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2311 |
|---|
| Symbol | |
|---|
| ID | 3580598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2718688 |
|---|
| End bp | 2719638 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637686020 |
|---|
| Product | putative secreted protein |
|---|
| Protein accession | YP_290367 |
|---|
| Protein GI | 72162710 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2367] Beta-lactamase class A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGAGC ATTCAGCGGC ACCCGCCCAC TCTGCCCCAG CGCGCAGGGC TTTCCTCCTC
ACCTTGGCCT TCCTAGCCGC CGTCACCGTG CTCGCGCTGC TCACCCCGCG GCATGCCAGC
GGACCGCCCG CGCAGCCGCC CGTCCCGGCA CCGGCCCCCA CCCCACGGCC GAGCCCGCCC
CCCACCGAAA CCCCGCAGCC ACCGCCGCTG AGCCCCGCCG AATACGACCG CCTCACCCGC
GTCATCGACG ACTACCTCGC CGGAGAGGAC TGCCGGCTCT CCCTCGCCCT CCACGACCTG
GCGAGCGGCG CCACCTACTC CTACCGGGCC GGGGAAACCT ACACCACAGC GAGCCTGGTC
AAGCTCAACA TCCTCGTGCT GCTCCTGCTC CGCGCCGAAG ATGAAGGCCG GGAACTGTCC
GCTGAAGAGG AGCGGCTGGC TGCCGAGATG ATCCGCTACA GCGACAACGA CGCCACCAAC
GACCTCTATG CGCGGATCGG CTTCGACGCA GGGTTCGCCC GCGGCAACGA GCGGCTCGGC
CTGCACGCCA CCAGGCCCAG CGGGCGCGGT GTCTGGGGCG CTACCGAGAC CACCGCCGCC
GACCAGTTGC GGCTGCTCCG CATCGTCTTC ACCGGGGACA GCCCGCTCTC CGAACGCAGC
CGCGACTACG CCAGTCAACT GCTCGGCACC GTGGCACCGG AGCAAGCCTG GGGGATCTCC
GCGGCGGCAA GCGAAGGCGA CACCGTGGAA CTGAAGAACG GCTGGGTGCC CCGGAGCAGC
GACGGAGACC GGTGGGTGCT CACCAGCGCG GGCCGAGTCG CGGGGGCAGA ACACGAATAC
CTGATCGTCG TGCTCTCCGA CCGCCACCGC GACTACGCCG GCGGCATCGC CCGCATCGAA
CACGTCGTTG CCGAGGTGGC CGCCGCGCTC AGCGACGCAA CGAGACAGTG A
|
|---|
| Protein sequence | MREHSAAPAH SAPARRAFLL TLAFLAAVTV LALLTPRHAS GPPAQPPVPA PAPTPRPSPP
PTETPQPPPL SPAEYDRLTR VIDDYLAGED CRLSLALHDL ASGATYSYRA GETYTTASLV
KLNILVLLLL RAEDEGRELS AEEERLAAEM IRYSDNDATN DLYARIGFDA GFARGNERLG
LHATRPSGRG VWGATETTAA DQLRLLRIVF TGDSPLSERS RDYASQLLGT VAPEQAWGIS
AAASEGDTVE LKNGWVPRSS DGDRWVLTSA GRVAGAEHEY LIVVLSDRHR DYAGGIARIE
HVVAEVAAAL SDATRQ
|
|---|
| |