Gene Tfu_2151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2151 
Symbol 
ID3581441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp2522143 
End bp2522685 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content68% 
IMG OID637685854 
Productpeptidoglycan-binding LysM 
Protein accessionYP_290207 
Protein GI72162550 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.174224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAGG CCGCGTTGCC GCATGCCCCC ACGCCATCCG CTGCCCGCGC TTCCTGTCGG 
TCTACGAGCG ACACGGACGC TGCCCGCGGC GGTCTGGAAA CCGATCTTTA CGACTGGTCC 
AAGGAGGTAC CGGAGTGGAT CAATGACGTC CCTCCACCCG AGGTCCGGCG AAGTCCGGCC 
AGTCCCGCCC GTAAACGGGC CGTACGCCCC GTCCCCGCAG GGCCCCCGCG GCTGACCAGG 
AGAGGACGGA TCGTCCTGTT CTGCCTGCTC GGCACGGCAG CCGCCGCCGG CTGCGCCCTG 
TTCGCCGTAG CGTTTCTGGC CCTCAGCGCC TCCAACGCGG ACGCTTCCAC CGACACGCTC 
CTCCACCTCC CCGAACGGTC ACGCACGGTC GTGGTCAACG AGGGAGACAC GCTCTGGGAG 
ATCGCTGAAC GACTCCGTCC CGCAGAAGAC CCGCGCAAGA CTGTGGACGA GATCGTCGAG 
ATCAACGGCC TCACCGAACC GGTGCTCACC CCAGGACAGG AACTCGTTCT ACCATCCCCC 
TGA
 
Protein sequence
MSQAALPHAP TPSAARASCR STSDTDAARG GLETDLYDWS KEVPEWINDV PPPEVRRSPA 
SPARKRAVRP VPAGPPRLTR RGRIVLFCLL GTAAAAGCAL FAVAFLALSA SNADASTDTL 
LHLPERSRTV VVNEGDTLWE IAERLRPAED PRKTVDEIVE INGLTEPVLT PGQELVLPSP