Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1949 |
Symbol | |
ID | 3580627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2279792 |
End bp | 2280310 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637685641 |
Product | hypothetical protein |
Protein accession | YP_290005 |
Protein GI | 72162348 |
COG category | [S] Function unknown |
COG ID | [COG3402] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.47797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACAG TCCAGCTTCG ACCTCCCAAA AACCGGGTTT CTCCTCGAGC GGTCTGGCTA TGGACCGTCA CGGACGCGAT CGAAGGGGCG GTGACAGTCG GAGGGATCAC ACTGACTGCG TGGGCTGTGG ACACAGCCCG GTGGGGCTGG CTGCCAGACT GGTTGGTGGA CCGGATCTGG TGGGTGCCCG TGGCCGTCGC CTGCTACAGC GTGGTCAAAC TGGTGGTCGC ACCGCGGTGG CGCTATCGGG TGTACCGGTG GGAGGTCACC GCCGACGTCG TCTACACCCG CAAGGGCTGG ATCAGCCGTA CCTGGCAGCT TGTGCCGATC ACCCGCCTGC AGACCGTGGA CCACACGCAG GGCTGGCTGG AGCGGCTCTT CGACTTGGCC ACCGTGGAAA TCCAGACCGC TTCACACGCC GGCTCCTCAA CGATCAAAGG GCTGCCGGAA GCGCAGGCCC GGCAGCTCTC CGAAGAACTA GCTGCACGCG CGGGACAACT GCGGAGTGAC GCCACGTGA
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Protein sequence | MTTVQLRPPK NRVSPRAVWL WTVTDAIEGA VTVGGITLTA WAVDTARWGW LPDWLVDRIW WVPVAVACYS VVKLVVAPRW RYRVYRWEVT ADVVYTRKGW ISRTWQLVPI TRLQTVDHTQ GWLERLFDLA TVEIQTASHA GSSTIKGLPE AQARQLSEEL AARAGQLRSD AT
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