Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1856 |
Symbol | |
ID | 3579535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 2163292 |
End bp | 2165352 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637685548 |
Product | prolyl oligopeptidase |
Protein accession | YP_289912 |
Protein GI | 72162255 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1505] Serine proteases of the peptidase family S9A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.149667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCAGCA ACCCGCCGCG TCTCTTGTCG CCTGCTGCTG TCCCTGACCC CTACCGCTGG CTGGAGGACG ACGACTCGCC GCGCTGCCTC CGCTGGCTCG CCGCCCGAGA CGCCGAGTTC CAGTCAGCTC TCCCGACTTG GCCCCTGCGC GACGCACTCG CCGCGGAGAT CCGCCACCTG GTCGCCACCA CCCAGTGGTC TCCGCCCCTG CGGCGCGGCG GTCTGCTGTT CGCCACCCGG CGCGACGGCG GCGACGAGCA TCCTCGCCTC GTCGTCATCG AACCTTCGGG CCGCGAACGC GTCCTGTTCG ACCCGACCGT CGGCGCCCCG GACGGCACCA CCACCCTCGA CGCCTGGGAG CCCAGCCCGG ACGGCACCCT GGTCGCAGTC CAGACGTCGC ACGGCGGGAC CGAACGCGGG GAACTGCACG TCCTGTCCGT CGCCACCGGC AGGCCCGTCG AACCTCCGAT TCCCGGGGTC CGCTACGCCC ACGTGGCGTG GCTGCCCGCC TCCTACGGAC CGGCGTTCTA CTTCGTGCGC CGCGACAGCG CTAACGGGCG GCGCGGTGTG TGGCTGCACC GGGTAGGCCG CAAGGAGGAC ACGCTGGTCC ACCCGTGCCA AGCGGCACGC ACCGTGCCCG GCGTGCGACT CCACCGCGAC CGGTGGCTCG TCGTCACCGA AAGCCACGGC ACCGGGCACC GCAACGACCT GTGGCTGGCC GACTTGGCCG CGAGCCCGCC CGAAGCTCCC GTGCTGCGGC CGGTGCACGT GGGCCGCGAC GTGGAATCGG AGGCCACGAT AGGCCCAGAC GGCCTGCTGT ACCTGCGCAC CACCTGGCAT GCCCCGCTGC GCCGGATCTG TGTGGCCGAC CCGGCCGCCC CCGCCCCGGA ACACTGGCGG GAAGTGGTCC CCGAGGCCCC GGACGCCCTC CTCGACGGGT TCGCGGTGGC GGGCCGTGCC GACGCCGTCG ACGTGGTGTA CACCCGCACC CGGCTCGGCA TCAGCGAACT GCGCGTCCAC ACCCCCGGCA GCGCCCGCGC CGACTGGGTG GTCCCCCTGC CCGGGGAAGG CATGGTCGCC CAGGTAACCG CGGACACCAG CGGGGAGGTG TACTTCTGCT ACGCCGACGT GGCCACCCCG TTGACGGTGT TCACGCTCGG GGCGGACGGC GTCCCCGTCC CTTGGCCACC GCACGCGGCC TCCCTGCCCC CGCGCACCCC GATCGAACGG CGCAGCCTGT CGTACCTGTC CTTCGACGGG GTCCGGGTGC CCCTCACGAT CTTTGCGCTT CCCGGCACCC CGCCGGGCCC CACCATCCTG CACGCCTACG GCGGATTCGG CCGCCCTCGA CAGTTCGGGT TCTCCGCCAC CGTGCTGGCC TGGCTGCGCC ATGGCGGCCG CTACGCCGTG GCACACGTGC GCGGCGGCGG CGACTTCGGC CGCACCTGGC ACCTCGCCGG TGCTGGACGG CACAAAGTAC GCGCGGTCCG CGACCTGGTC GCCGCCGCGG ACTTCCTTGT CGCCCGGGGA GAGTGCCGCC GCGACGAACT GTGCCTTTCC GGCGGCTCCG CCGGCGGTCT GCTCGTGCTG GCCGCGATCG CCCGCCGCCC GGACCTGTGC GCCGCAGTCA TCGCGTTGGC CCCGCTCGCG GACATGATCC GCTTCCCGCA GCTCGGCTTG GGCGCGATGT GGAGCCGCGA ATTCGGCAGC GTCACCGACC CCGAGGATTT CGCGGCACTA CTCGACTACT CCCCCTACCA CCGGGTGCTC CGCACTCCGC CCGCCGCGTA TCCGGCGGTG CTCCTCACCG GTTTCCACGG CGACACCCGC ACCGGCCCTG CCCATCCCCG GAAGATGTGC GCGGCCCTCC AAGAACGGAC GCGCGGCCCG CGTCCCATCC TGCTGCGCTA CGAGCACGGG GTGGGCCACG GGCCGCGCGC GGTCAGCCGC GCGGTCGAAC TCGCGGCCGA CGCCCATGCG TTCGCGGCCG CGCAGACAGG GCTGTCCCCG ACCCGCCGGC CCTCGGCGGG CGCGGCCCTC AGCACGCAGC AAGGGAGGTG A
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Protein sequence | MPSNPPRLLS PAAVPDPYRW LEDDDSPRCL RWLAARDAEF QSALPTWPLR DALAAEIRHL VATTQWSPPL RRGGLLFATR RDGGDEHPRL VVIEPSGRER VLFDPTVGAP DGTTTLDAWE PSPDGTLVAV QTSHGGTERG ELHVLSVATG RPVEPPIPGV RYAHVAWLPA SYGPAFYFVR RDSANGRRGV WLHRVGRKED TLVHPCQAAR TVPGVRLHRD RWLVVTESHG TGHRNDLWLA DLAASPPEAP VLRPVHVGRD VESEATIGPD GLLYLRTTWH APLRRICVAD PAAPAPEHWR EVVPEAPDAL LDGFAVAGRA DAVDVVYTRT RLGISELRVH TPGSARADWV VPLPGEGMVA QVTADTSGEV YFCYADVATP LTVFTLGADG VPVPWPPHAA SLPPRTPIER RSLSYLSFDG VRVPLTIFAL PGTPPGPTIL HAYGGFGRPR QFGFSATVLA WLRHGGRYAV AHVRGGGDFG RTWHLAGAGR HKVRAVRDLV AAADFLVARG ECRRDELCLS GGSAGGLLVL AAIARRPDLC AAVIALAPLA DMIRFPQLGL GAMWSREFGS VTDPEDFAAL LDYSPYHRVL RTPPAAYPAV LLTGFHGDTR TGPAHPRKMC AALQERTRGP RPILLRYEHG VGHGPRAVSR AVELAADAHA FAAAQTGLSP TRRPSAGAAL STQQGR
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