| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1781 |
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| Symbol | |
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| ID | 3580461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2082907 |
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| End bp | 2083770 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637685475 |
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| Product | ABC transporter permease |
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| Protein accession | YP_289839 |
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| Protein GI | 72162182 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0603975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCAGT TCATCAGTCT GACCTTCGAG GGCATCGCCA ACGGCGCGAT CTATGCGGCC
TTGGGGCTGT CCCTCGTCAT CATCTACCAG GCGACCCGGG TAGTGAACTT CGCTCAGCCT
GCCCTCGCGC TCATGGCGGT CTACCTCGCC TACACCGTCA CCCAGGCGAC GGGCAGCTAC
TGGCTCGGTT TCGCCACCGC CATGGCCAGC GGAACCCTGC TCGGTGTGGT CACCGAACGG
CTGCTGGTCC GCCCCGTGCA GGACAAGTCC CCGCTCAACG CCATCATCCT CACGCTCGGC
CTGCTGATGG TGCTGCAAGG GCTGGCCGGC ATGATCTGGG GCAACCTGCA GCACTCCTTC
CCGCCGCCGA TGAGCTTCCG CGACTTGGCC GCAGTCCCGA TCTCCCCAGA GGAGATCTTC
GCGCTCGCCG CGGTCGGGGT AGTCGCCACA GTGCTCTTCC TCCTCTACCG CTTCACCCCG
CTAGGGCTGC GGATGCGGGC CGCCGCCTTC CACGCAGAGT CCGCGCGGCT CAGCGGCGTC
CGGGTCGGGC TGATGCTCAC CCTCGGCTGG GGCATCGCCT CGGCGATCGG CGCTCTTGCC
GGAATGCTCG CGGTGCCCCC GCTGCTGTCC CCGACCGTGC TCGACGCCGT GTTCGTCTAC
GGCATCGCGG CCGCCGTACT CGGCGGCTTG GACAACCCGT TCGGCGCGCT GGCCGGCGGC
CTGGTGCTGG GCGTGGGCCT GTCCTATGTC TCCGGCTACG TGGGCTCCGA ACTCACCACC
CTCGCCGCCC TGGCGATCCT CATTGCCGTG CTTAGCCTGC GCCCCGCCGG ACTCTTCTCC
CGGGCGACCG TGCGAAAGGT GTAG
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| Protein sequence | MNQFISLTFE GIANGAIYAA LGLSLVIIYQ ATRVVNFAQP ALALMAVYLA YTVTQATGSY
WLGFATAMAS GTLLGVVTER LLVRPVQDKS PLNAIILTLG LLMVLQGLAG MIWGNLQHSF
PPPMSFRDLA AVPISPEEIF ALAAVGVVAT VLFLLYRFTP LGLRMRAAAF HAESARLSGV
RVGLMLTLGW GIASAIGALA GMLAVPPLLS PTVLDAVFVY GIAAAVLGGL DNPFGALAGG
LVLGVGLSYV SGYVGSELTT LAALAILIAV LSLRPAGLFS RATVRKV
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