| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1051 |
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| Symbol | |
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| ID | 3579603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1228083 |
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| End bp | 1229153 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637684746 |
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| Product | putative polyprenyl synthase / dimethylallyltranstransferase |
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| Protein accession | YP_289112 |
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| Protein GI | 72161455 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.154231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCCT CGCACTTGTC TCCCGTCGCC TTCGTGCGCC CCCTTGTCGA TGCCGAACTG
GCGGCCTTCG TCGCGAGCCG ACGCCCGCTG CTGCTGGAGA TCGGCGCGGA GTGGGAACCG
GTGCTGGCCG CCCTCGAAGC CATGATCAGC GGCGGCAAGC GGCTGCGGCC GGCGTTCTGC
TACTGGGGAT GGCGCGGCGC GGGCGGGGGA GAGGAGCCCG GCCTCTACAC GGCCGCGGCA
GCCTTGGAGC TGCTCCAGGC GTGCGCGCTG ATCCACGACG ATGTGATCGA CAACAGCGAC
ACCCGGCGCG GGCAGCCCGC CGTGCACCGC AGGCTCGCCG CCCTGCACCG GGAGTCGGGA
TGGCACGGCG ACCCCGACGA GTTCGGCCGG GGCGCGGCGA TCCTGCTGGG GGACCTGTGC
CTGGCGTGGT GTGAAGACAT GTACCAGTCG AGCGCGCTCC CCGCGGAAGC GCTCGCTGCG
GGGCGGGGCC CCTTCGACCT GATGCGCACC GAGGTGGTGG CCGGCCAGTA CCTGGACTTG
GTGGAGCAGG CGCGCGGCGC GGACACCGTG GAGGCAGCGC TGCGGGTGAT GCGGTTCAAG
TCGGCCAAGT ACACCATTGA GCAGCCCCTC CACCTGGGTG CAGCGCTGGC GGGACGGTAC
GCCGAGCTGG CCCCCGCCTA CACCGCCTAC GGCATCCCGT TGGGGATCGC CTTCCAACTG
CGCGACGACG TCCTCGGGGT GTTCGGGGAC CCGGAGGAGA CGGGGAAGCC TGCAGGGGAC
GACCTGAGGG AGGGGAAGCG CACGGTGCTG GTGGCAGAGA CGCTGCGCCG GGCGGCAGCG
GACGACGCCG AGCAGTTCCG GCGCCTGCTG GGCGACCCCG AGCTGGGGGC CGAGGAGATC
GCCTGGATGC GTTCGGTCAT CGTGGACAGC GGTGCGCTGG AAGCCTGCGA AGCCCGGATC
GCCGACTATG TGGCCGATGC GACGCAGGCC CTGGAGAACG ACGTGATCGC CGACGACGCG
CGTTCCGCGT TGGCGGACCT CATCGTCGCT GCCACCGCAC GTAAGCACTA G
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| Protein sequence | MSSSHLSPVA FVRPLVDAEL AAFVASRRPL LLEIGAEWEP VLAALEAMIS GGKRLRPAFC
YWGWRGAGGG EEPGLYTAAA ALELLQACAL IHDDVIDNSD TRRGQPAVHR RLAALHRESG
WHGDPDEFGR GAAILLGDLC LAWCEDMYQS SALPAEALAA GRGPFDLMRT EVVAGQYLDL
VEQARGADTV EAALRVMRFK SAKYTIEQPL HLGAALAGRY AELAPAYTAY GIPLGIAFQL
RDDVLGVFGD PEETGKPAGD DLREGKRTVL VAETLRRAAA DDAEQFRRLL GDPELGAEEI
AWMRSVIVDS GALEACEARI ADYVADATQA LENDVIADDA RSALADLIVA ATARKH
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