| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0797 |
|---|
| Symbol | |
|---|
| ID | 3579868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 942934 |
|---|
| End bp | 943440 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637684490 |
|---|
| Product | competence/damage-inducible protein cinA |
|---|
| Protein accession | YP_288858 |
|---|
| Protein GI | 72161201 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCAGTA CTGCTGAGCT GGTAGCCCGC GTCCACGCGC TGCTCGCGGA GCGCGGTGCG
ACGCTCGCTG TGGCCGAGTC CCTCACCGGC GGCATGATCG GTGCTGCTTT CACCGCGCTG
CCCGGGGCTT CCGCGGTTTT CCGCGGGGGA GCTGTCGCCT ACGCCACAGA GACCAAAAAC
ACGGTTCTGG GCGTTCCCCA GTCCCTGCTC GCCGAGCACG GGGCCGTCCA TCCGGAAGTC
GCCGTGGCGA TGGCCCGCGG CGCCCGCCGG ATTTTTGCGG CCACTTTCGG TCTCGCGGTC
ACCGGGGTCG CCGGACCCCG GCCGCAGGAC GGACAGCCCG TCGGAACCGT CTACGCCGCT
GTGTCCTGCC CGGAAAACCG TGATAACCTG CGAAAACTTC AGCTCGCGGG GGATCGGGCA
GCGATTAGGG AGCAGACTGT CGCCGCGGCG GCGGCCCTCC TGCGCGATAC CCTCGTAGAC
GACGTGGCAC AAAACACCGT GAAATAA
|
|---|
| Protein sequence | MPSTAELVAR VHALLAERGA TLAVAESLTG GMIGAAFTAL PGASAVFRGG AVAYATETKN
TVLGVPQSLL AEHGAVHPEV AVAMARGARR IFAATFGLAV TGVAGPRPQD GQPVGTVYAA
VSCPENRDNL RKLQLAGDRA AIREQTVAAA AALLRDTLVD DVAQNTVK
|
|---|
| |