Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0781 |
Symbol | truB |
ID | 3581346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 923146 |
End bp | 924027 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637684474 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_288842 |
Protein GI | 72161185 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGACG GCGTTGTCAT CGTCGACAAG CCCGCAGGCT GGACTTCCCA CGACGTGGTG GCCCGGGTGC GGCGCCTTGC CGGCACTCGT CGGGTCGGCC ACGCCGGCAC CCTTGACCCG ATGGCGACGG GGGTGCTGGT CGTCGGAGTC GGCAAAGCGA CCCGGCTGCT GGGGTATCTC GCGTTGACGG AGAAGGTCTA CGAGGCGACA ATCCGCCTCG GCCAGTCCAC CACCACCGAC GACGCGGAGG GAGAGCTGCT GGAGCGCCGC CCCGCCGACC ACATCGACGA GGCCGCGGTC CACGCGGGGA CCCGCGCGCT CACCGGCGTG ATCCACCAGG TTCCGCCGCA GGTCAGTGCG GTCAAAGTGC GGGGGCAGCG CGCCTACCGC CGTGCCCGGG CAGGCGAGAC GGTGGAACTG AAAGCGCGCG AGGTGACCGT GCACGAGTTC ACCGTCACCG GGTTCCGCCG CGTCGACAGC CCGGACGGCG CCTTCGTCGA CGTTGACGCC CGCGTGACCT GCTCCAGCGG CACCTACATC CGTTCCCTGG CACGCGACCT GGGGGCGGAC CTCGGCGTGG GCGGGCACCT GACCGCGCTG CGCCGCACCC GGGTAGGGCC CTACACCGTG GAGCAGGCCG CCACCCTGGA CGAGCTGGCC GCCGAGTTCA CCGTGATGCC GCTGGCGGAA GCGGTGGCTG CGGCGTTCCC GGTCCGTCGG CTCAGCGCGG GCGAAGCCCG CCGTGTGGTC CACGGCCACC GGATCTCCCC GAGCGGGCAT TCCGGTCCGG TGGGGTTGTT CGCCCCCGAC GGCCGGGTGC TGGCCCTGGC GGAGAACCGG TCGGGCAGCA GCCAGCCCGT GGTGGTCTTC GCGGGAAGCT GA
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Protein sequence | MADGVVIVDK PAGWTSHDVV ARVRRLAGTR RVGHAGTLDP MATGVLVVGV GKATRLLGYL ALTEKVYEAT IRLGQSTTTD DAEGELLERR PADHIDEAAV HAGTRALTGV IHQVPPQVSA VKVRGQRAYR RARAGETVEL KAREVTVHEF TVTGFRRVDS PDGAFVDVDA RVTCSSGTYI RSLARDLGAD LGVGGHLTAL RRTRVGPYTV EQAATLDELA AEFTVMPLAE AVAAAFPVRR LSAGEARRVV HGHRISPSGH SGPVGLFAPD GRVLALAENR SGSSQPVVVF AGS
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