Gene Tfu_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0625 
Symbol 
ID3580657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp727964 
End bp728686 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content72% 
IMG OID637684318 
Productregulatory proteins, IclR 
Protein accessionYP_288686 
Protein GI72161029 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.916177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAACT CTAGCCCATC CAGCGGGGTA GGTGTGCTGG ACAAGACCAT GTCCGTCCTC 
ACCGCCCTGG AATCCGGTCC CGCGTCCCTC GCCCAGCTCG TACGGCTCAC GGGACTGTCA 
CGGCCTACAG CGCACCGGCT GGCGGTCGCC TTGGAGCGAC ACCGCATGGT CGCTCGGGAC 
AGCCAAGGGC GCTTCATCCT GGGGCCCCGG ATCACCGAGT TGTCCATCGC CACCGGGGAG 
GACCGGCTGC TGGCCGTCGC CACCCCGATC CTCGCCCAGT TGCGCGACCA CACGGGGGAA 
AGCGCGCAAC TGTACCGCCG TCAAGGGGAC GTCCGGGTGT GCGTGGCCGC CGCGGAACGC 
ATGAGCGGAC TGCGCGACAC GGTCCCGGTG GGCAGTGAGC TTCCCATGAC CGCGGGCTCA 
GCCGCCCAGG TCCTGCTGGC CTGGGAGGAC TCTGAGCGGA TCCGCCGCAC GCTGCGCGGC 
GCGCACTTCA CCGCGGCGAC CCTGGCCCAG GTGCGCCGCC GCCGGTGGGC AGAGAGTGTA 
GGCGAACGGG AGCCGGGGGT CGCCTCCGTG TCCGCGCCGG TCTTCGCGCC GAGCGGGCGC 
ATCATCGCCG CGGTCTCCGT CTCCGGTCCG CTGGAACGGC TGACCCGCTC CCCAGGCCGG 
CTGCACGCCC CCGCTGTACT CGCGGCCGCA AACAAGATCA GCGAAGCGCT GCGCCACACC 
TGA
 
Protein sequence
MDNSSPSSGV GVLDKTMSVL TALESGPASL AQLVRLTGLS RPTAHRLAVA LERHRMVARD 
SQGRFILGPR ITELSIATGE DRLLAVATPI LAQLRDHTGE SAQLYRRQGD VRVCVAAAER 
MSGLRDTVPV GSELPMTAGS AAQVLLAWED SERIRRTLRG AHFTAATLAQ VRRRRWAESV 
GEREPGVASV SAPVFAPSGR IIAAVSVSGP LERLTRSPGR LHAPAVLAAA NKISEALRHT