Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0530 |
Symbol | |
ID | 3580328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 600855 |
End bp | 602993 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637684218 |
Product | superfamily I DNA/RNA helicase |
Protein accession | YP_288591 |
Protein GI | 72160934 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCCAG CAGAGTCCGG CGAACCATGG GGGAGAATGC CGTCCGCCGA GGAGATCCTG CGTGGTCTCG ACCCTGAACA AGAGGAAGCG GTCCGAGCCG TGCGCGGCCC GGTGTGCATC CTCGCCGGGG CAGGAACCGG GAAGACCCGC GCAATCACCC ACCGCATCGC CTACGCCGTC GCCACCGGGG TCGTCCCGGA ACAGCAGATC CTCGCCGTCA CGTTCACCAC GCGAGCCGCC GGGGAGATGC GCGGGCGACT GCGTGCCCTC GGAGCGCCCC GCGTGCAAGC CCGCACCTTC CACGCCGCGG CCCTGCGCCA ACTCTCCTAC TTCTGGGCGG ATGCGGTCGG CGGCCCCAAA CCCACCCTCA TCGACAGCAA GATCAAAACC GTGGCCGCGG CCGCACACTC CTGCGGCTTC CAAGTGGACC GGACCGAGCT GCGCGACCTC GCCGCCGAAA TCGAATGGGC GAAAGTCACC CAGACCCGGC CCACCGACTA CGAGACCGCC GTGGCCAAAG AGGGCCGCAC CCCCCCGATG CCGCCCCGCG ACGTCGCCCG CGTCTACGAG GCGTACGAGG AGCTCCGCAG CGAACACAAC CTGCTCGACT TCGAGTCGAT GCTGGAGCTC ACCGTGGCGA TGATCCACGA ACGGCCGGAC ATCGCGGAAC GCATCCGCAG CCAGTACCGC TACTTCGTGG TCGACGAGTT CCAGGACGTC AACCCGCTGC AGAAACTCCT CTTGGACGCC TGGCTGGGGG ACCGCGACGA CATCTGCGTG GTCGGCGACC CCAACCAGAC CATCTACACC TTCGCCGGGG CCACCCCCAG CTATCTCACG GGTTTCCCCG AGGTCTACCC CCACGCCACT GTCGTCCGAC TCGTCCGCGA CTACCGGTCC ACACCCCAAG TGGTGCGGGT CGCCAACGCC GTGCTCCGAT CAGGCGGCGC CGCGGCGCTC TCCCCCGACT ACCGGATGGA GCTTGTCGCC CAGCGGCCGG ACGGCCCCGA ACCTACCTAC ACCGAGTACG ACGACGACCT CGCGGAAGCC ACTGCGGTCG CCGAGAAGAT CACCGGGCTC ATCAACGCGG GCACCCCCGC CCGGGAGATC GCGGTCCTGT TCCGCACCAA CTCCCAGTCC GCCACCTACG AGCAGGCGCT CGCCGACGCC GGAGTGCCCT ACACCGTGCG CGGCGCCGCC CAGTTCTTCG ACCGCCCCGA AATCCGCGCG GCCCTGCACA CCCTGCGCGG CGCCTCCCGG GCCGATGACG GGGAATCGCT GGTCACCACG GTCCGCCACC TGCTCCAGCC GCTTGGCCTT ACCGAACAAC CGCCCGAAGG CCGCCAAGCC CGCGAAAAAT GGGAGTCGCT GGCGGCGCTC GCCCAGCTCG CCGAGACCAT CGCGGCCCAG CGCCCAGAGG CGCGTCTCGC AGACTTCGTC GCGGAACTCC ACACCCGCGC CGCCACCGAA CACGCGCCCG GATTCGACGG GGTCACCCTC GCCTCCCTGC ACGCGGCCAA AGGCTTGGAA TGGGACGCGG TGTTCCTGGT CGGGCTCACC GAAGGCCTGC TGCCGATCAT CTACGCCGAA ACCCCGGAAC AGGTGGAAGA GGAACGCCGC CTCTTCTACG TAGGGGTGAC CCGAGCCAGG GAGCACCTCC ACCTGTCGTG GGCGCTGGCC CGGTCCCCGG GAGGCCGCCG CACCCGCACG CCCTCCCATT TCCTCGACGG GTTGCGGCCC GCCGCTGCGG CACCGGCGCG GCAGCACCGG GAACGGCACC GGAAGAAAGA CCGCATGGTG CGCTGCAGGG TCTGCGGCGC CACCCTGCTG GAAGCCGTGG AGCGCACCCT GGGACGCTGC CAGGACTGCC CGGCCAGCGT CAACGAGGAG CTGCTGGAAC GGCTGCGGCA CTGGCGGCGT GAGGCGGCCG CACTGCAGAA AGTGCCCGCC TTCGTCATCT TCACCGACGC CACGCTGCAG GCGATCGCGG AACAGGAGCC GTCCACCGCC GCGCAACTCG CCCGCATATC CGGTGTGGGG GAGCGAAAAC TGAGGCGCTA CGGTGAAGCA ATCTTGACGC TCTGTGCGGG TGGCACACCC GAGCAGGCCA TCAGTGGACT CAGAGAGGAG ACACCGTGA
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Protein sequence | MGPAESGEPW GRMPSAEEIL RGLDPEQEEA VRAVRGPVCI LAGAGTGKTR AITHRIAYAV ATGVVPEQQI LAVTFTTRAA GEMRGRLRAL GAPRVQARTF HAAALRQLSY FWADAVGGPK PTLIDSKIKT VAAAAHSCGF QVDRTELRDL AAEIEWAKVT QTRPTDYETA VAKEGRTPPM PPRDVARVYE AYEELRSEHN LLDFESMLEL TVAMIHERPD IAERIRSQYR YFVVDEFQDV NPLQKLLLDA WLGDRDDICV VGDPNQTIYT FAGATPSYLT GFPEVYPHAT VVRLVRDYRS TPQVVRVANA VLRSGGAAAL SPDYRMELVA QRPDGPEPTY TEYDDDLAEA TAVAEKITGL INAGTPAREI AVLFRTNSQS ATYEQALADA GVPYTVRGAA QFFDRPEIRA ALHTLRGASR ADDGESLVTT VRHLLQPLGL TEQPPEGRQA REKWESLAAL AQLAETIAAQ RPEARLADFV AELHTRAATE HAPGFDGVTL ASLHAAKGLE WDAVFLVGLT EGLLPIIYAE TPEQVEEERR LFYVGVTRAR EHLHLSWALA RSPGGRRTRT PSHFLDGLRP AAAAPARQHR ERHRKKDRMV RCRVCGATLL EAVERTLGRC QDCPASVNEE LLERLRHWRR EAAALQKVPA FVIFTDATLQ AIAEQEPSTA AQLARISGVG ERKLRRYGEA ILTLCAGGTP EQAISGLREE TP
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