Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0434 |
Symbol | |
ID | 3579825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 491294 |
End bp | 492229 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637684122 |
Product | L-proline dehydrogenase |
Protein accession | YP_288495 |
Protein GI | 72160838 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCGCA CCCTCCTGCT GCTCGCGGCC CGCTCGCCGC GCTGCCGCGA CTTCGTGACC CGCTCCCCGC TGACCCGGGG CGTGGTCCGC CGGTTCGTCG CCGGAGACAC GCTCGACGCG ACGCTCCCTG TCCTCCGCCA GCTCACCGCT GACCGCCACG TCACCGTCGA CTACCTGGGG GAGGACATCA CCGACGCTGA GCAGGCCAGC CGCACAGTGG ACGCCTACAC GCACCTGCTC ACCGCCCTGG GAGAGCACGG CCTGGCCCCG CGGGCCGAGG TGTCGGTGAA GCTCTCCGCG CTCGGCCTGG CGCTGCCCCG CGACGGTGCA CAGCTCGCGT TGGACCACGC CCGGCAGATC TGCGCGGCCG CTGAAGCGGT GGGCACCACG GTCACCGTGG ACATGGAAGA CCACACCACC ACGGACGCCA CCCTGGACAT CGTGCACCAG CTCCGCGTCG ACTTCCCCCG GACCGGGGCT GTGCTCCAGG CCTACCTGCG GCGCACCGAA GCCGACTGCC GGGACCTGGC CGTGCCCGGG TCGCGGGTGC GCTTGTGCAA AGGCGCCTAC GACGAGCCTG CTACGGTGGC CTACCGCGAC CGGGCCGAAG TGGACCGCTC CTATGTGCGC TGCCTGCGCA TCCTCATGGA CGGCCCCGGC TATCCCATGG TGGCCACCCA CGACCCGCGC CTCCTGCGGA TTGCCGCGTT CCTCGCAAGG TCCGCCGGGC GCAGCGCGGA CTCCTACGAG TACCAGATGC TTTACGGAGT CCGTACCGAC CTGCAGGCGG CTCTGGCCGA TCGGGGCGAG CGGGTGCGGG TGTACGTGCC GTACGGTGAG CAGTGGTACG GCTATTTCAT GCGGCGACTG GCTGAACGCC CCGCGAATAC GGCGTTCTTC GCCCGCGCTC TCTTCGCCGG GGGAGCCGTG CGATAG
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Protein sequence | MLRTLLLLAA RSPRCRDFVT RSPLTRGVVR RFVAGDTLDA TLPVLRQLTA DRHVTVDYLG EDITDAEQAS RTVDAYTHLL TALGEHGLAP RAEVSVKLSA LGLALPRDGA QLALDHARQI CAAAEAVGTT VTVDMEDHTT TDATLDIVHQ LRVDFPRTGA VLQAYLRRTE ADCRDLAVPG SRVRLCKGAY DEPATVAYRD RAEVDRSYVR CLRILMDGPG YPMVATHDPR LLRIAAFLAR SAGRSADSYE YQMLYGVRTD LQAALADRGE RVRVYVPYGE QWYGYFMRRL AERPANTAFF ARALFAGGAV R
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