Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0281 |
Symbol | |
ID | 3578878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 314100 |
End bp | 315338 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637683965 |
Product | putative polyamine-binding lipoprotein |
Protein accession | YP_288342 |
Protein GI | 72160685 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.565719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGTAGAA AACACACCAT CAATCCTGCT GTGCTGCGTG GCTTCACCCA GCGTCGTGTG AGCCGCCGCG ACACCTTCAA ACTCGCTGGT CTTTCCGCTG CCGCCCTGGC GCTCGCCGGC TGCGGTATCG AGGGACAGGG CCAGCAGTCC ACCACCTCGG AGAACTTCTG GAACGGGAAG GAAAGCAACG GCAAAGTCCG CTTCGTCAAC TGGCCGCTCT ACATGGACCC CGAAAAGCCG GAGCTCAAGC GGTTCACCGA GCAGACCGGC ATCGAGGTCG AATACAGCGA GGCCATCCAG GACATGCCGT CGTGGTTCGG AGAGATCCAG CCGCTCCTGG CCAACGGCGA CGACATCGGC GCCGACCTCA TGGTCATCAG CAACGGGCAG GAGCTCACCA AGCTCATCGC ACTGGGCTAC CTCGCCCCGC TGAAGCGCGA CCAGTTGACG AACTTTGCCG AGTTCGCCGA CGAGTTCTAC ACGATGTCGG CCTACGACTA CGGCAACCAG TACACCGTTC CCTACGCCTC GGGGATCACC GGCATCGCCT ACGACCCCGA ACGGGTCGGA CGCGAAATCA CCTCCATCAA GGACCTGTGG GACCCCGAGT TCAAGGGACG GGTCGGCATG ATGCGCGACC CGCAGGAGAT CTCCAACTTC GCGCTGCTCT ACAACGGTGT CGCTCCGGAA GACTCCACCC CCGAGGACTG GGAAGCCGCT GCCGAAGTCC TGAAGAAGCA GCGCGACGAC GGGATCGTGC GTGCCTACTA CGAGCAGGAC TACATCCAGC CGCTCACCAA CGGCGACATC TGGATCACCA TGGCCTGGTC CGGTGACATC TACCAGGTCA ACGCCGAAGA AGGCACCAAC CTCAAGTTCG TTATCCCCGA AGAGGGCGCC ACGCTGTGGA CGGACAACCT GACGATCCCG ATCACGGCGC AGAACCCGGT CGACGCCCTC ATGCTCATCG ACTTCTTCTA CGACCCGGAC ATCGCCGCGA GCCTCACCGA GTACATCAAC TACATCTGCC CGGTGCCGCA CGCGAAGGAA GTACTGCTCG ACCGGGCCGC GGAACTCGAC GGCGAAGACA GAGAAGCCCT CGAAGAGCTG GCGAACAGCC CCCTCGTCTT CCCCTCCGAG AGCGACTACG CCAGACTCCA CAACTACGTG GTGTTGGACG TGGAAGCCGG GGAAGACGAA GAATTCAACT CCATCTTCCA AGCGGTGACC CACGCTTAG
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Protein sequence | MRRKHTINPA VLRGFTQRRV SRRDTFKLAG LSAAALALAG CGIEGQGQQS TTSENFWNGK ESNGKVRFVN WPLYMDPEKP ELKRFTEQTG IEVEYSEAIQ DMPSWFGEIQ PLLANGDDIG ADLMVISNGQ ELTKLIALGY LAPLKRDQLT NFAEFADEFY TMSAYDYGNQ YTVPYASGIT GIAYDPERVG REITSIKDLW DPEFKGRVGM MRDPQEISNF ALLYNGVAPE DSTPEDWEAA AEVLKKQRDD GIVRAYYEQD YIQPLTNGDI WITMAWSGDI YQVNAEEGTN LKFVIPEEGA TLWTDNLTIP ITAQNPVDAL MLIDFFYDPD IAASLTEYIN YICPVPHAKE VLLDRAAELD GEDREALEEL ANSPLVFPSE SDYARLHNYV VLDVEAGEDE EFNSIFQAVT HA
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