Gene Tfu_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0183 
Symbol 
ID3579761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp206397 
End bp207149 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content68% 
IMG OID637683866 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_288244 
Protein GI72160587 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.168499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGATA ACCGTGCAGC CGCTCCCGGT TGGCACCTCG GCCCGCTGGT CGGCTTCGAC 
ATCGAGACGA CCGGCATCAA CCTGGAACAG GACCGTGTCG TCACTGCCGC GATCATCGAA
ACGGCTGCTG ACGGCTCCCA GCGGACCCGG CGGACCTGGC TCGTCAACCC CGGAGTCGAG
ATTCCCCCCG AGGCCGTGGC GATCCACGGC ATCAGCACCG AACTGGCGGT GGCCGACGGA
ATCCCCGCCC CCGTTGCCGT AGCGGAGATC ACCGACCTGC TGGAGCAGGT ACTCCAGTCG
GGAACGCCGC TGGTCATCAT GAACGCTCCC TTCGACCTCA CCATCCTCGA CCGGGAGTGC
CGCCGCTACG GGGTGGTGCC GCTGTCGGAG CGGCTTGACA CGGTCGCCCC GGTCATCGAC
CCCCTGATCC TGGACCGGCA CATCGACCGC TACCGCAGGG GGAAACGCAC TCTGGAAGCG
CTCTGCGCCC ACTACGGGGT CCCGTACGAC GGTTCACATG AGGCGAGCGC GGACGCGGTA
GCAGCTGCAG CAGTGGCCCG GGGGATCGGG CACGCCGCGG CGCACGTGGC TGCCCTGTCC
CCTCGGGAGC TCCACGAACT GCAGGTGACC GCAGCTGCCC AGCAGGCCGA GTCTTTGGCG
GCGTTCCTCC GCAGGAAAGG ACTGAGTCCG GAGAGGGTCA CCCGGGCATG GCCTCTGGTT
CCCGTCCCTG GCACGCAGCC GAAGCTCATC TGA
 
Protein sequence
MTDNRAAAPG WHLGPLVGFD IETTGINLEQ DRVVTAAIIE TAADGSQRTR RTWLVNPGVE 
IPPEAVAIHG ISTELAVADG IPAPVAVAEI TDLLEQVLQS GTPLVIMNAP FDLTILDREC
RRYGVVPLSE RLDTVAPVID PLILDRHIDR YRRGKRTLEA LCAHYGVPYD GSHEASADAV
AAAAVARGIG HAAAHVAALS PRELHELQVT AAAQQAESLA AFLRRKGLSP ERVTRAWPLV
PVPGTQPKLI