Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0013 |
Symbol | |
ID | 3579775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 18230 |
End bp | 18988 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637683694 |
Product | putative integral membrane protein |
Protein accession | YP_288076 |
Protein GI | 72160419 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.287986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGGGCT TCAGCCATGC GACCACCGGA GTCCTGGTCG GAGTCGCTGT CGCTGCTCCG CTCGCTGCCG CCGCGGGCAC CCCTCCCACC CCCATGGGCC TGCTGGCGTG GGCGTTACTC GGCGCGGGCT CGGCCTTAGT CCCCGACCTC GACCATCCCT CCTCGACCGC CACCCGCTCC CAAGGGTTCG TCACCGGCCT GCTGTCCCGG GGAATGCGCG CCCTGTCGCT CGCCGTCTAC CGGCGCACCC GAACCCCAGC CGACCGCTCC GACGGGGAAC ACCGCCACCT AGGCCACACC CCCGTCTTCG CGGCCGCAGT CGGCGCAGTG ATCGGCCTGC TCTGCCACCT GTCCTGGTGG GCGACCCTGG TCACCGCATG GTTCCTGGCT TTTCTCGGCC TCCGCGCGCT CCGCAAAGTC GCGTGGCGGG GACTGCGTAC CGCGCTCGGC TCGTGGCCGG GCGCGGCCCT CGGCGCGCTC TGCGTGGCCG CACTGTTCCT GACCGCGTGG GACAACTACC CGCCCGGGTG GATCGTCGGC GCCGTCGTCG CCCTCGGCAT GATCGTCCAC TCCCTAGGAG ACGCGCTCAC CTCCTCGGGA GTTCCCCTCG CCTGGCCGTT CACCGTCAAC GGCCGCCGCT GGGCCATGCT CGGCGTGCCC CGGTGGATGC GGTTTCGTAC CGGAACCTGG CCGGAATGGG TGGTGGGGGC CGTGTCCCTC ACCGGATCGC TCGCCGTCGG CTACGCGCTC GTCGCCTAA
|
Protein sequence | MMGFSHATTG VLVGVAVAAP LAAAAGTPPT PMGLLAWALL GAGSALVPDL DHPSSTATRS QGFVTGLLSR GMRALSLAVY RRTRTPADRS DGEHRHLGHT PVFAAAVGAV IGLLCHLSWW ATLVTAWFLA FLGLRALRKV AWRGLRTALG SWPGAALGAL CVAALFLTAW DNYPPGWIVG AVVALGMIVH SLGDALTSSG VPLAWPFTVN GRRWAMLGVP RWMRFRTGTW PEWVVGAVSL TGSLAVGYAL VA
|
| |