Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_1501 |
Symbol | |
ID | 5877562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 1533410 |
End bp | 1534105 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641541849 |
Product | sporulation sigma factor SigK |
Protein accession | YP_001663124 |
Protein GI | 167040139 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02846] RNA polymerase sigma-K factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGGAAG TTGTTGTTGC AATTTTGGCT TCAATTGTAA AGGAAATCTT AAATCTTGGT TACTTGACAA ACACCAACTC TTTTCCCAAT CCACTTACTC CAGAAGAAGA AAAGAAATAT TTAGAAGCTT ATAAAAACGG TGATGAGGAA GCGAGGAATA TTTTAATAGA AAGAAACTTA AGGTTGGTAG CTCATGTTGT TAAAAAGTAC AGTGGCACAG GTAAAGATAT AGATGATTTA ATATCTATTG GGACAATAGG GCTTATAAAA GCAATTTCCA CCTTTGATTC TTCTAAAGGA ACACATCTTG CCACATATGC AGCCAGATGT ATAGAAAACG AAATACTTAT GTCTATACGA ACGGAAAAAA AGATGAAAGG AGAGGTTTTT CTCCAAGACC CTATTGGTGT CGATAAAGAG GGCAATGAGA TATCTTTAAT GGATGTCCTT GGCACAGAGG AAGATGAAAT ATCAGAGCAA GTGGAGAAAA AACTTCAAAT TAAAAAGCTG TACAGTAAAA TGAACAGCGT TTTAAAAAAT AGAGAAAAGT TAATTATAGA AATGAGATAC GGGTTATATA ATGGTAAAGT GAGAACTCAA AGAGAAATAG CAAAAATGCT GGGTATATCT CGATCATATG TTTCAAGGAT TGAGAAGAAG GCTTTAAATA AGCTTTTTAA AGAGCTTTCC ATGTAA
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Protein sequence | MWEVVVAILA SIVKEILNLG YLTNTNSFPN PLTPEEEKKY LEAYKNGDEE ARNILIERNL RLVAHVVKKY SGTGKDIDDL ISIGTIGLIK AISTFDSSKG THLATYAARC IENEILMSIR TEKKMKGEVF LQDPIGVDKE GNEISLMDVL GTEEDEISEQ VEKKLQIKKL YSKMNSVLKN REKLIIEMRY GLYNGKVRTQ REIAKMLGIS RSYVSRIEKK ALNKLFKELS M
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