Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_1353 |
Symbol | |
ID | 5877664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 1389938 |
End bp | 1392106 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641541702 |
Product | ribonuclease R |
Protein accession | YP_001662979 |
Protein GI | 167039994 |
COG category | [K] Transcription |
COG ID | [COG0557] Exoribonuclease R |
TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases [TIGR02063] ribonuclease R |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00219332 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAATGA GCGTAAAAGA AAGACTTTTA GAATTAATGA GAGAAGAGAA TTATAAACCT TCTAAAATAG AAGAAATAAT GAAAATATTA GGGATAGACT ATAGTCAAAA AAGCATTTTA GAAAAAATAT TAAAAGAGAT GGAAAAAGAA GGCCTTGTTT TTAAAACAAA ACGAGGTAAA TATGCTCTTC CTGAAAGATT AGATTTAGTA AAAGGTAAGA TTGAATTTCA TTCAAGAGGC TATGGCTTTT TAATTCCCGA AGATAGCAAT ATAAAGGACA TATTCATACC TGTAAGTGGC ATGAACGGTG CAATGCATGA CGATACTGTT TTAGTGAGAG TTACAAAAAG GGTGGATGGA AAGAGCGAAG AAGGAGAAGT TGTAAAAATT CTCAAAAGGG CAAATACAAC TATTGTTGGA ACTTACGAAA AAAGCAAAAA TTTTGGCTTT GTAGTGCCAG ACAACAAAAA GATCCATCAA GATATATTTA TTCCTAAAGG AGAAGATAAA GGCGCTAAAA CAGGCATGAA AGTTGTAGCC AGAATTACTA AATGGCCTGA AGGAAGGCGA AGTCCTGAAG GGGAGATTAT AGAAGTATTA GGATACAAAG GTGACCCTGG CATAGATGTA ATGTCTATAA TACGGGCGTA TGATATTCCT GAAGTTTTTC CTAAAGAGGT TTTAAAAGAA GCAGAAGAGA TACCGACAGA AATTCCTGAA GAAGAGAAAA AGAGAAGAGT TGATTTGACT GATTTAGATT TTGTCACAAT TGATGGAGAA GATGCAAAAG ATTTGGACGA TGCAGTATGT GTACAAAAAC TTCAAGATGG CAATTATCTT CTGTATGTGA GTATTGCAGA TGTGAGCCAT TATGTGAAAG AAGGTTTGAA TTTAGATAAA GAAGCATTAA AAAGAGGTTG TAGTGTATAT TTCATTGATA GAGTAATACC AATGTTGCCA CCTAAGTTAT CTAATGGTAT TTGCAGTCTA AATCCGCAGG AAGAAAGACT GACTCTCACT GTTAAAATGA AAATAAACTC TCAAGGAGAA GTTGTAGACC ATGAAATTTT TGAAAGCATT ATAAAAAGCA AAGAGAGAAT GACATATACA AATGTTTACA AACTTTTAGA AGAAAATGAT GAAGAATTAA AAAAGAGGTA TCAGTACCTA TTGGAAGATT TTAAACTAAT GAAAGAGCTA GCTCTTGTTT TGCTAGAGAA AAGGAAAAGA AGAGGCAGTG TAGATTTTGA TTTTCCTGAA GCTAAAGTAA TAGTAGACGA GAAAGGTAAA CCAATAGATG TTGTAAAAGT CGAAAGGAAT ATAGCTCATA GGATAATTGA AGAATTTATG TTAGTAGCTA ATGAAACGGT AGCTGAGCAT ATGCATTGGG TAAATGTACC ATTTGTTTAT AGAATACACG AACATCCGGA TATAGAGAAA TTAATTGCTT TCAATAAATT TATTCACAAT TTGGGATACC ATATAAAAGG AATTGAAGGA GGACAAATAC ATCCAAAGTC TTTGCAAGAG TTAATAAGAC AAGTGAGAGG AAAGAGTGAG CAAAGAGTTG TAGAAACTTT GCTTTTAAGG TCTTTAAAAA GAGCAAGATA CAGTCCAGAA GACATTGGCC ATTATGCTTT GGCGACCCAA TATTATACTC ACTTTACTTC CCCCATAAGG CGATATCCTG ACCTTATAAT TCATAGGATA ATCAAAGAAT ACATAAATGG AAAATTAACA AAAAAAAGGC AACGCCATTA CAACAGAATT TTAAATGACA TTGCTTTAAA ATCTTCTGAG AGAGAAAGAG CAGCAGAAGC TGCAGAAAGA GAAATAGAAG AATTAAAGAA AGTAGAGTAC ATGGCAGATA GAATAGGGAA TGTTTATAAA GGGATAATTT CCAACGTGAC AAATTACGGA TTTTTTGTAG AACTTGACAA CACTGTGGAA GGGTTAGTAG ATGTTGCTTC ATTGGAGGAT GACTATTACC ATTTTGATCC AGAAAGATAT GTTTTAATTG GTGAAAAGAG CAAAAAAGTT TACTCTATAG GTAAAGAGGT TTATGTAAAA GTTGTTCATG TAGATGTGGA TAGGAGAGAA ATAGACTTTG TTTTAGCAGA AGAAGAAAAA GATAATTTAG AGATTGGCTT AACCGAGCAT AAAAGCTGA
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Protein sequence | MGMSVKERLL ELMREENYKP SKIEEIMKIL GIDYSQKSIL EKILKEMEKE GLVFKTKRGK YALPERLDLV KGKIEFHSRG YGFLIPEDSN IKDIFIPVSG MNGAMHDDTV LVRVTKRVDG KSEEGEVVKI LKRANTTIVG TYEKSKNFGF VVPDNKKIHQ DIFIPKGEDK GAKTGMKVVA RITKWPEGRR SPEGEIIEVL GYKGDPGIDV MSIIRAYDIP EVFPKEVLKE AEEIPTEIPE EEKKRRVDLT DLDFVTIDGE DAKDLDDAVC VQKLQDGNYL LYVSIADVSH YVKEGLNLDK EALKRGCSVY FIDRVIPMLP PKLSNGICSL NPQEERLTLT VKMKINSQGE VVDHEIFESI IKSKERMTYT NVYKLLEEND EELKKRYQYL LEDFKLMKEL ALVLLEKRKR RGSVDFDFPE AKVIVDEKGK PIDVVKVERN IAHRIIEEFM LVANETVAEH MHWVNVPFVY RIHEHPDIEK LIAFNKFIHN LGYHIKGIEG GQIHPKSLQE LIRQVRGKSE QRVVETLLLR SLKRARYSPE DIGHYALATQ YYTHFTSPIR RYPDLIIHRI IKEYINGKLT KKRQRHYNRI LNDIALKSSE RERAAEAAER EIEELKKVEY MADRIGNVYK GIISNVTNYG FFVELDNTVE GLVDVASLED DYYHFDPERY VLIGEKSKKV YSIGKEVYVK VVHVDVDRRE IDFVLAEEEK DNLEIGLTEH KS
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