Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_5016 |
Symbol | |
ID | 4246671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 7666501 |
End bp | 7668621 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638109825 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_724401 |
Protein GI | 113478340 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACAAG AGCGTATTGA TATCCATCCT ACCCACAGTC ATGGTGACTT TAAGCTCCGT AGTGGAAAAC CTTTTCCATT CGGTGCAACT ATGGTGTCTG GAGGAGTAAA CTTTTCCATC TTCTCTTCTT ATGCTACATC TTGTACATTG GTTTTGTTTC AAAAAGGTGC TTTAAAACCA ATGGCAGAAA TTCCTTTTCC TGAAGAATTT CGGATAGGGA ATGTTTATTG TATGATTGTC TTTGATCTTG ATGTTGAGAA CATCGAATAT GGCTATCGCA TGGATGGACC GAATAATTTC CATGAGGGTC AATGGTTCGA CAAAAGTAAA ATTCTCATGG ACCCCTATGC TAAGATTATT GGGGGTAGGG ATGTTTGGGG AAAAACACCA AACTGGGATG ATATTTATCA ACACCGGGGG AGAATTCCCT ATGATGATTT TGACTGGGAA AATGACCGCC CACTAGAAAT TCCACCACAA GATCAGATTA TCTATGAAAT GCACGTTCGT AGCTTTACGG CTCATCCTTC TTCTGGTGTC AAACATCCAG GCACATTTGC TGCTATTCGC GAAAAAATTC CTTACCTCAA AGAATTAGGT GTTAACGCGG TGGAGTTGAT GCCTATCTAT GAATTTGATG AGTTTGAAAA TTCTCGGCCC AGCCCCATCA CAGGAGAAAT GCTCTACAAT TATTGGGGTT ATAGTACAGT CGGGTTTTTT GCTCCTAAGG CAGGGTACGC AGCGACAGGT AAGTTAGGAA TGCAGATGGA TGAGTTAAAA ACTCTAGTTA AAGACCTGCA CAAAAATGGG ATTGAAGTAA TTCTTGACGT TGTTTTCAAC CACACAGCAG AAGGAAATGA AAACGGTCCG ACAATTTCTT TCCGGGGTAT TGACAATAAG ACATATTATA TGCTAACACC AGAAGGTTAT TATTTTAACT TTAGTGGTTG TGGCAATACT ATTAATTGTA ATAACCCCAT TGTTCGTAAT GTGGTGTTAG ATTGTTTGCG CTATTGGGCA AGTGAATATC ATATTGATGG TTTCAGATTT GATTTGGCTT CAATTCTTGG ACGTGACCCC TGGGGCGCAC CTTTAGCAAA TCCTCCATTA TTAGAAACTT TGGCTTTTGA CCCAATTTTA GCTAACTGTA AGTTGATTGC AGAAGCTTGG GATGCTGGTG GTTTATATCA AGTGGGTTCC TTCCCTGCTT TTGGACGTTG GGCCGAATGG AATGGTAAGT ATCGCGATGC AATTCGCAAG TTTATTAAAG GTGATTGTAC TGTAGGGGAA ATGGCACAAA GGATACAGGG TTCTCCAGAC CTCTATGCTT GGCAAGGTCG TGGACCGGCA ACATCTATTA ATTTTATTAC TGCCCACGAT GGTTTTACTT TGGCTGATTT GGTTTCCTAC AATGATAAGC ATAATGAAGC TAATGGTGAA AATAATAATG ATGGTGCTAA TGATAACGAA AGTTGGAACT GTGGGGCAGA GGGTTGGAGT GATGACCCTG GAATAAATGC TTTGCGTAGC CGTCAGATGC GAAATGCGAT CGCAATTATG ATGGTTAGTC AAGGTGTTCC TATGTTGCTG ATGGGAGATG AAATAGGGCG GAGTAAAAAT GGTAATAATA ATACTTATTG CCATGACTCA GAACTAAATT GGCTAAATTG GGAGCTTCTG GAAACTAATG CTGAGTTATT TAGGTTTGTG AAGAATTGTG TGGCATTTCG GAAAGCTCAC CCTATATTGA AAAATCAGAA CCATTTCCGA AATCAAGATT ATGTAGGTAG TGGAAAATCT GATATTACTT GGCATGGTAC TCAAGCTTGG AATGCTGACT GGTCAGATAA TTCTCGAACT TTGGCTTTTA TGCTTTGTGG TAAACATGCT ACAGAGGTGA CAAAGCAAGA TAATGATATT TATGTAGCAA TGAATATGCA CTGGGACTCT CTCTGGTTTA ACATTCCCGG TTTATCAGAT GGGAAACATT GGCATATTTT TGTTAATACT GCTTGTGCTT CGCCAGAAGA TGTTTGGGAA CTTGGGAGCG AACCTGTTTT AGAAAATCAA CATGGGTTAT TACTTGGGGA TCGATCTATA GTTATTTTAG TAAGTAAATA A
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Protein sequence | MLQERIDIHP THSHGDFKLR SGKPFPFGAT MVSGGVNFSI FSSYATSCTL VLFQKGALKP MAEIPFPEEF RIGNVYCMIV FDLDVENIEY GYRMDGPNNF HEGQWFDKSK ILMDPYAKII GGRDVWGKTP NWDDIYQHRG RIPYDDFDWE NDRPLEIPPQ DQIIYEMHVR SFTAHPSSGV KHPGTFAAIR EKIPYLKELG VNAVELMPIY EFDEFENSRP SPITGEMLYN YWGYSTVGFF APKAGYAATG KLGMQMDELK TLVKDLHKNG IEVILDVVFN HTAEGNENGP TISFRGIDNK TYYMLTPEGY YFNFSGCGNT INCNNPIVRN VVLDCLRYWA SEYHIDGFRF DLASILGRDP WGAPLANPPL LETLAFDPIL ANCKLIAEAW DAGGLYQVGS FPAFGRWAEW NGKYRDAIRK FIKGDCTVGE MAQRIQGSPD LYAWQGRGPA TSINFITAHD GFTLADLVSY NDKHNEANGE NNNDGANDNE SWNCGAEGWS DDPGINALRS RQMRNAIAIM MVSQGVPMLL MGDEIGRSKN GNNNTYCHDS ELNWLNWELL ETNAELFRFV KNCVAFRKAH PILKNQNHFR NQDYVGSGKS DITWHGTQAW NADWSDNSRT LAFMLCGKHA TEVTKQDNDI YVAMNMHWDS LWFNIPGLSD GKHWHIFVNT ACASPEDVWE LGSEPVLENQ HGLLLGDRSI VILVSK
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