| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4627 |
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| Symbol | rimM |
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| ID | 4246281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 7114738 |
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| End bp | 7115364 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638109496 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_724072 |
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| Protein GI | 113478011 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGAAT GGATTGAAAT TGGTAAAATT GTTGCACCTC AAGGTTTGAA AGGAGACTTA
CGAGTATATC CTAGCTCAGA CTTTCCAGAA AGATTCACCG AACCCGGAAA AAGGTGGTTA
TTATCACCGG GTCAAGTAGA ACCGATATCT ATCGAATTAC TGAGTGGTCG TTATGTTCCT
GGTAAAGGGT TATATGTAAT AGAATTAGCA GGAATTAAAA GCCGCCAACA AGCTGAAGCA
TTAAGAAATA GCCAGTTATT GATTGAAAAA GGCGATCGGC CTCAACTTGA AGCTGATGAA
TTTTATGTAC CAGACTTAAT TGGTTTAACA GTTATTAATC AATTAAACGG GAAAACTATT
GGCAAAGTTA TTAATATTAT TTTTGCAGGA AATGACTTAT TAGAAGTCGA AAAAATCTCT
ACAGATACCC CTGTTATTTC TGAAGTTGTT GAAAATAATT TACCTTCAAA AAGTAAGAGA
AGTAGAGACA CAAAGAATCA GAAAAAAAAT CAATCCCCCC CATCAAAAAA AATTCTAATT
CCCTTTGTCA AAGAAATTGT ACCGATAGTT AATTTTGAAC AAAGTATCAT TGAAATTACT
CCTCCTGATG GCTTAATTGA CCTGTAA
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| Protein sequence | MSEWIEIGKI VAPQGLKGDL RVYPSSDFPE RFTEPGKRWL LSPGQVEPIS IELLSGRYVP
GKGLYVIELA GIKSRQQAEA LRNSQLLIEK GDRPQLEADE FYVPDLIGLT VINQLNGKTI
GKVINIIFAG NDLLEVEKIS TDTPVISEVV ENNLPSKSKR SRDTKNQKKN QSPPSKKILI
PFVKEIVPIV NFEQSIIEIT PPDGLIDL
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