| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4604 |
|---|
| Symbol | recO |
|---|
| ID | 4246258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 7082009 |
|---|
| End bp | 7082875 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638109476 |
|---|
| Product | DNA repair protein RecO |
|---|
| Protein accession | YP_724052 |
|---|
| Protein GI | 113477991 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.643517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAC TCTATAAAGC AACAGGAATA AACCTCAAAG CTATGGCTTT AGGAGAATCA
GACCGTTTAT TAACTATCTT AACTCCAGAA TATGGCTTGA TTCGAGTAGT AGCTCCCGGA
GTGAGGAAAC AAAAATCTAA ACTGGGGGGT AGAGGTGAAC TATTTGTAGT AAATCAATTA
TTAATATCTA AAGGGCGATC GCTTGACAGA ATTAACCAAG CAGAAACCAT AACCTCTTAC
ACTGGCCTTA GTCAAAACCT GGGAAAACTA GCGGCAGGTC AATATTTAGC AGAATTAGTT
CAACAAATAG CTCTGAAGGA AAATCCTCAA ACTGAACTTT TCCATCTACT AAACGAACAC
TTGGAACGTA TAGAACAACT ACAACATAAA ACTGACAGAC TCTGGTCAAC CCAACTCATA
GCATTTTTAG CTCATGGTAT CTATCATTTA CTCGCCATAG AGGGAATAGC ACCCCAAGTC
CATCAGTGTT GTGCTACAGG AAATGAATTA CAGCCAGATT TTAATAATTC TAAATGGCAA
GTCGGATTCA GTATAGATGC AGGAGGAATT ATTAAAGTTG ATGAGACTTC TGTTGTACAA
TCTTTCTGTA AAGATTTGTC AGACTATTAC TTAAGTACCA AAATTAACAC TCTCATTAAT
GCTAATCAAC TTTCACTACT TCAGCAGCTA CCACAACCTC AACTTCAGAC TATAGTTAAA
CTTACTTCTT ATCAAGATTG GGTAAAAGTG GAACAACTTT TAAGAAAATA TACCCAGTAT
CATTTAGGTT ATTCTATTCG CTCTGCAGAA TTGATTGATA CTTATTTAAA ATCCATATCT
CCTTTAATAA ACAATGCAAC TATCTGA
|
|---|
| Protein sequence | MAKLYKATGI NLKAMALGES DRLLTILTPE YGLIRVVAPG VRKQKSKLGG RGELFVVNQL
LISKGRSLDR INQAETITSY TGLSQNLGKL AAGQYLAELV QQIALKENPQ TELFHLLNEH
LERIEQLQHK TDRLWSTQLI AFLAHGIYHL LAIEGIAPQV HQCCATGNEL QPDFNNSKWQ
VGFSIDAGGI IKVDETSVVQ SFCKDLSDYY LSTKINTLIN ANQLSLLQQL PQPQLQTIVK
LTSYQDWVKV EQLLRKYTQY HLGYSIRSAE LIDTYLKSIS PLINNATI
|
|---|
| |