| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4465 |
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| Symbol | |
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| ID | 4246118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 6886447 |
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| End bp | 6888165 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638109348 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_723925 |
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| Protein GI | 113477864 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00227345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAC TTATATGGAA TACTTTTAAG CACAGTCCTA GTGTTTTTAG TATAGCATTA
TTGATGGCAG GCTCAGCAAT CGCTGCTGAG ACTCCTCTAC AAAATTTAGG AACTGATGAA
AGTCCTGTAA ATCAGAACTT AACCCAAGGC AGCATTGAAA TTGCTCAAAA TTTTGATACT
CGGTTAATGC CAATGGATGA CCCTTCACTT ACACCAGTAG GGGTTTCAGA CTTAGAAAAT
GGCGAGTACA TGGACCAGGT AACATCTGTA ACTCAGTTAT CAGATGTACG ACCTACTGAC
TGGGCTTTCC AAGCTCTACA ATCCTTGGTA GAGCGTTATG GTTGTATAGC AGGTTATCCT
GACGGTACTT ATAAAGGAAA TCGAGCGATG ACTCGCTTTG AGTTTGCAGC CGGTTTAAAT
GCCTGCTTGG ATAGAGTCAC AGAATTAATT GCTGCTGCAA CTTCAGACCT AGTAACTAGA
GAAGACTTGG CAGTTTTACA AAGACTACAA GAAGAGTTCA GCGCAGAACT AGCTGCTTTG
CGGGGACGAG TTGATTCTTT GGAGGCCAGA ACATCAGAAT TAGAGGCCAA TCAATTCTCT
ACTACAACAA AATTAAACGG TGAGGTATTG TTCTGGTTAA GTGATACCTG GGGAGAAAGA
GCCGCCGGTC GTGGGACAAA AAAGAGTGAG GAGGACAAAA CTGAGACAAC CTTTGCTTAT
CGAGTTCGTT TAATCTTTGA TAGTAGTTTT ACTGGGAAAG ACCGCTTGAG AACTCGTTTA
CAAGCTCGTA ACGTTCCAAA ATACGACAGT CGAGATTTGA CGAACACTAT GATGACTCGT
CTAGGTACTG ACGATGATTT TGATGACGAT TTTGTTCTCA ATAAATTGGC CTATCGTTTT
CCTTTACTAA ATGGTAGAGG TCAAATAGAA CTAGCAGCTA ATGGTTATGG TCTGGACGAC
TTCATGGGAC CCATTACACC TTTAGATAGT AGTGGTTCTG GTTCTATTTC AAGATTTGGG
CGATTTAACC CTACTTTTTA TCGTGCTCCA GCTGATGCTG GTGTTAAATT TGCTTATGCC
TTCAACGACG CAATTAAGTT GACAGTTGGT TATGCTGCAC CAGATCCAGA AGACCCTCAA
GAAGGTAAAG GTATTTTTAA TGGTGGCTTC AGTGGATTTG GCCAAGTTAC CTTTGAGCCA
AATGATAGGA TAGTTTTTCA AGCAGGTTAT GTGCGTGGCT TCCATCCTAA AGGAGATGTG
AACTTAACTG GAAGTACAGG TAGCTTTAAA GCCAAAGATC CTTTTAAGGG TATACGGACT
AGTGCAGATA ATATCAACTT TGAAGCCCAG TGGTTAATTA CTGAAGGTTT CCAAATAGGT
GGTTGGTTTG GTGCCTCTTT TGCCCGTCCT GAAGATAACA ATGATACAGA TGATATCACT
ATTGTTAATG GTGCTTTGAC TTTAGCTTTC CCAGACCTAC TCAAAGAAGG TAGCTTAGGA
GGTATTATCA TTGGTGTACC ACCAATTATT ACTGATGGTG GTGATGATGA TTCTCTGAAA
GACGATGATA CTTCTATTCA CGTTGAGGTA CTTTATCGCT TCCAAATGAA TGACAATATT
GCCATTACTC CTGGTGTATT TGTGATTACT AACCCTAATC ACATTGAGGA TAATGAAACT
CTCTGGGTTG GTACAATAAG AACTCAATTC AGATTCTAG
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| Protein sequence | MIKLIWNTFK HSPSVFSIAL LMAGSAIAAE TPLQNLGTDE SPVNQNLTQG SIEIAQNFDT
RLMPMDDPSL TPVGVSDLEN GEYMDQVTSV TQLSDVRPTD WAFQALQSLV ERYGCIAGYP
DGTYKGNRAM TRFEFAAGLN ACLDRVTELI AAATSDLVTR EDLAVLQRLQ EEFSAELAAL
RGRVDSLEAR TSELEANQFS TTTKLNGEVL FWLSDTWGER AAGRGTKKSE EDKTETTFAY
RVRLIFDSSF TGKDRLRTRL QARNVPKYDS RDLTNTMMTR LGTDDDFDDD FVLNKLAYRF
PLLNGRGQIE LAANGYGLDD FMGPITPLDS SGSGSISRFG RFNPTFYRAP ADAGVKFAYA
FNDAIKLTVG YAAPDPEDPQ EGKGIFNGGF SGFGQVTFEP NDRIVFQAGY VRGFHPKGDV
NLTGSTGSFK AKDPFKGIRT SADNINFEAQ WLITEGFQIG GWFGASFARP EDNNDTDDIT
IVNGALTLAF PDLLKEGSLG GIIIGVPPII TDGGDDDSLK DDDTSIHVEV LYRFQMNDNI
AITPGVFVIT NPNHIEDNET LWVGTIRTQF RF
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