Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4338 |
Symbol | |
ID | 4245990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 6688073 |
End bp | 6690226 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638109225 |
Product | hypothetical protein |
Protein accession | YP_723803 |
Protein GI | 113477742 |
COG category | [R] General function prediction only |
COG ID | [COG4639] Predicted kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.427391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAAAC CTTTAATATG TCACTTCCTC ATCGGTCCCC CAGGATCAGG GAAATCAACC TTTGCCACCA AACTGTCAAC ATTAGGAGAT TATACCATCA TTTCTACAGA CACAATACGC TCCAAACTCT ATGGCAACGA AACCATCCAA GGAGAATGGA GGGAAATAGA AGCCACCTTA CTCAAGCAAA TTACCCAAAG CATCAAAGCA GGTATCCCCA TCATTTACGA TGCCACCAAT GCCATACGCC CCTATCGCAT AGCCTTACTA AAGAAACTAC CCCAAAAAAA CTGTGCATGG ATAGCATGGC ATCTAAAAAC CTCTCTCCCT ACCTGCCTAA AATGGAATAA ACAACGGACT CGTAAAGTAC CAGAAACTAC TGTCAAAAAA ATGTTTCTAT CCCTGAAAAA CTTTCAGCCC ATAATAGCAG AAGGCTTTGC AGCAGTACAT ACTCTTCAAA AACCTAACTT TAACCCCAAA ACAATACAGG AAAAAATTGA CTCCCTAACC CGCAGCAGCG TTAACCGCCA AAACCGTCTC TCGTGCCTAG AATTTCATTC CTATTCCCGA CTCCTAGACT TCGAGCGCCT CATGCATTTA ATTGCCCTAT TCATTAAATA TCCAGGCCTT GGCAATTTAG AACAAACAGA ACCCGATATA CTAATTGCTA TATTTAAAGA AGTACCAGAA TTTCCAGATG CTTTAGCAGA AATAGTAGCA GTTATAGCCT TATTAAAAGG AGAAGTTTAT GCAGACAGAG AAGCGATCGC TACTGACTTA GCTTGGTTAG AAAAAAACGG CATCGTAGCA GAAGGACAAA CTGTTACTCC GGCAATATTA CGTCAGGAAA TATCCCCCCA ACCCCTGACA AAAAGGGGGA AAAAGAAAAA TGGAACATCT GATCTTCCCC TTAAAAGAAA AAAAGGGAAG GAGATAAAAG CGAGAAGTGA AAACAATTCA GAGCAAGACA TCATTCCCCA TCCTTATTCA GATATTGCTC CGTTTAAAAG GTTAATAACC GCCATTCGTT TGATCTTAAA CCGACCATTT CTCAGAAACG ACGATCAAAA AAGTTTAGAC ATTTTTGCAG AAGAATTATC CAAACAACCA GGAATAGGAG GCAACTGTCG AGACAAATTT CGCAAGGATG TGGAATATAT TCTCAAACCC TTTCATATAT TGCCAGAATT TCCCATGCGA CGTGGTTATT TTGCCGGGAC AGGAATTTTG TCCCAGGAGC AATTAAAACG TTTGCAGGAT ATATTACAAG GGCAAGTTAA AAGTATAGAA GATCCGATGG CTTTATCTAC TTATGACCAG TTTTGTCAAC GGATGATTTC TTCTAAAATT AACATTGAAA AACCTTATCC AATTAGAGCG ATCGCTCATA AATCAATGAT CGACTTAGAG TTCGTTGATG AGAATGTATT ATCTCGGAAA CTTGATCAAA TTGAAGAATT TATTATTCAT GGAAAATTAG TCGAGTTAGA GCGGTTAAAA GGCAAAGGAA AATTTAGTGG AGGTGAAGAA GGAAAGTTTT CTGTTCGGTT ATTACAGATA GTATTTTTTA ATAATGCTTG GTATTTAGGT TTTGAATATG AGGGGGGTAC TTTCAATGGC TTATTCAGGT TTGAACGTTT AGATCGCTTA CGTATTAGTC AAGATTTAGG AAAGTCTTGC CCAGAAAAAC AGCGCTCAAA ATTAGAACGG TTACAAAAAC TTTTAGATGC CAGCTTTGGG ATATTTTTAG GTTATAAAGC TGAGGATCAA AGTAAATTTT TAAGTAAAGA CAAGAAGAAA AAAAAGGAGG TAATAGTAAC AGTTGAGTTG TGGTTTAATC AGGAGAAATT TGAGTTTGTA TGTGAAAAAA CTAAACTGTT TCCATCAGGA ACATTGAAAA TGTCACCTCC TCCTCAAGGT AGTAGTTTTA TCCAGAAGAA GGAATATGAA AAAATTTTTG ATTTGGAAGG TACAAAAAAT AAACATTTTC CTTATCGGTT TCGAGTAGAG TTACCTTGTT GGTGTATAGA AGATGTGAGT TTTTTAAGTT GGGTTATTGG GTTTGGCGGT CATGTAAAAG TAAAAAAACC AGATGAATTA ATCGATAGTG TTTATGAAAT TGGGTTAGGT ATTGTTGAAG TTTATGATCA GTGA
|
Protein sequence | MNKPLICHFL IGPPGSGKST FATKLSTLGD YTIISTDTIR SKLYGNETIQ GEWREIEATL LKQITQSIKA GIPIIYDATN AIRPYRIALL KKLPQKNCAW IAWHLKTSLP TCLKWNKQRT RKVPETTVKK MFLSLKNFQP IIAEGFAAVH TLQKPNFNPK TIQEKIDSLT RSSVNRQNRL SCLEFHSYSR LLDFERLMHL IALFIKYPGL GNLEQTEPDI LIAIFKEVPE FPDALAEIVA VIALLKGEVY ADREAIATDL AWLEKNGIVA EGQTVTPAIL RQEISPQPLT KRGKKKNGTS DLPLKRKKGK EIKARSENNS EQDIIPHPYS DIAPFKRLIT AIRLILNRPF LRNDDQKSLD IFAEELSKQP GIGGNCRDKF RKDVEYILKP FHILPEFPMR RGYFAGTGIL SQEQLKRLQD ILQGQVKSIE DPMALSTYDQ FCQRMISSKI NIEKPYPIRA IAHKSMIDLE FVDENVLSRK LDQIEEFIIH GKLVELERLK GKGKFSGGEE GKFSVRLLQI VFFNNAWYLG FEYEGGTFNG LFRFERLDRL RISQDLGKSC PEKQRSKLER LQKLLDASFG IFLGYKAEDQ SKFLSKDKKK KKEVIVTVEL WFNQEKFEFV CEKTKLFPSG TLKMSPPPQG SSFIQKKEYE KIFDLEGTKN KHFPYRFRVE LPCWCIEDVS FLSWVIGFGG HVKVKKPDEL IDSVYEIGLG IVEVYDQ
|
| |