Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3878 |
Symbol | |
ID | 4243541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 5999123 |
End bp | 6001252 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638108807 |
Product | lipase |
Protein accession | YP_723389 |
Protein GI | 113477328 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0292806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAT TTTACAGTAT TTACATAGAA ACGGGGTCTA GTCCTTTGAG TGGGACACGT AACGATGTAG AGGTAAAACT GTTCGGTAGT CAAAACACTA CTGAATATAT GGAACTTACG AGCTTTGATG ATATCCCATG GGAAAAAAAC CAAAACAGAA CTTTTCATCT GGGAAAATTG AATATTGGCG ATTTAGAAGC AGTAGAGTTT CGTCTAAAAT TACAAAACGG TCAGAAGCTT GATCCTCTAT CAGAAAGCGA TGTGACGTTG GGTCCTGTAT TATTGGAGTT AGAAAAAGCA GGGATATTCG ATGGGAAGTT CGATGGGGTA TTAGAAGGGG ATGAAACATC GGATTTAGAA AGCTTGGATA TTGATGGCTG GGGATTAGAA TCTTTTACGA TCTCTGATGG TCAGAAATAC TTTGATACTT CAGAACTATC AGGAGAAGAG TCGTACTTGT TTGATGTTAG TGAAACAAAA AAATTTGATG TTAAAGAAAC CGAAAACTTT CCAGGAACCG TTGTTCCAAT AGATTTGGTT GGTGGTAGCA ATGATATTAT TGATGGTACT TGGTTTCATG TCTTGGACAA GGGTGAGCTT GATATCAATA ACTTAAGAGA TAAATTAGGA AGAATTGATC AAGAACAAAA TACATATTTT GTGACACACG GATTCTCTCG TGGAGCGGGA AATAGTTGGA TACCAGAAAA TAACATCAAC ATCTCTAATG GTGAGAGGGA AACAAGCAGG GAAACAAGCT TATCAAAAGC GATTCGCCAA TACGATCCAA ATGCTAATAT TCTTTTCGTA GATTGGGCTG AAAAAAATTA CAAGTTGGAT ATAAATCTCG AGGCACTGGC CTTGAATTAT GCTGAGGCAC GGGCAAACCT TTCCAAGATC ACTGACGATA TAGTAGAATA TATCACAAGA TATAACGTAA ATCCTGAAAA GCTAACATTC GTAGGTCACA GTCTTGGTGC TCAAATTGCT GGACTAGTTG GGCAAAGGGT AGAAATGGAT CGAATTATTG GCCTGGATCC TGGCGGCGTT GAACCTTTCA GTGATTTTTT ACCTGATCAG CCCAATGCTC GGCTTTCTGA GGATGATGCT GAAAATGTTT ATGTTATCCA TTCTGAAACG CTATATGGAT ATGATTGGCC TGCAGGTGAC TTTGACCTAT ATCTCAATGT TACTAATTAT CAGGATTTGG GTCAATATGG TATAATGATT TACGAACAAC CCGTTCCCCA GGAGCAGTGG CATGATTATG CGATAGATGT TGCTATAAAT TTATTCGAAG GCACTGATTA CGCAGGGGAA TCAAAACGGA GAAATGAAGA TGGTTTAGCG GAACTAACAA ACCTAGATAT AGAGACCTTC TTTGATCCTA ACTCATATCC CACAACAAAA AATTCATTCT ACGACTTACT GAATGAAAAG TTTCCACAGA ACAGAGCTTT ATTTTTCGAC GAAAACTTAC AACCAGAAGT CGATAAAAGC GGCGATGATA TAATGAGAGG TAGTGAAAAT GATGATTCCT TAAATAGTGG TCCAGGCAAT GATAAAATTA TAGGTAAAGG TGGTAACGAT ACACTCAATA GCGGTCCAGG CAATGACAAA ATATTCGGAC AATCTGGGGA TGACTATTTA ATAGGTCGCT CTGGTAACGA TATTTTATTG GGGGGAAAGG GTGACGATAC TCTCGAAGGT GGTATCGGTC GCGATCGCCT CAATGGTGGA CCAGGAAACG ACGAGCTTAT AGGTGGTGGC AGTATAGATT TCTTCATTTT TAACACAAAC CGACCATTTA ATGAAGAAGA CTTGGGTAAG GATATCATAA CTGACTTTAA GGTTGATCAA GACTTTATCC TATTGGATAA ATCTACTTTT GATGCCATTG AAAGTGACTC AAGCAGCAGA AAAAATCCAG GGTTTAGTCG TGTTGAAGAG TTTGAAGTAG TAGAAACAGA TGAAAGTGCA GCTAGTTCAG AAGCTATCAT TGTTCACAGC ACAGAAACTG GTAATTTGTT CTACAATCAA AATGGTAGTG CTTCAGGGTT CGGAACAGGT GGTGATTTTG CCACTGTAGC TCCTGAATTA AGTTCAGAAA ACTTTATACT TAGAGTTTAA
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Protein sequence | MTEFYSIYIE TGSSPLSGTR NDVEVKLFGS QNTTEYMELT SFDDIPWEKN QNRTFHLGKL NIGDLEAVEF RLKLQNGQKL DPLSESDVTL GPVLLELEKA GIFDGKFDGV LEGDETSDLE SLDIDGWGLE SFTISDGQKY FDTSELSGEE SYLFDVSETK KFDVKETENF PGTVVPIDLV GGSNDIIDGT WFHVLDKGEL DINNLRDKLG RIDQEQNTYF VTHGFSRGAG NSWIPENNIN ISNGERETSR ETSLSKAIRQ YDPNANILFV DWAEKNYKLD INLEALALNY AEARANLSKI TDDIVEYITR YNVNPEKLTF VGHSLGAQIA GLVGQRVEMD RIIGLDPGGV EPFSDFLPDQ PNARLSEDDA ENVYVIHSET LYGYDWPAGD FDLYLNVTNY QDLGQYGIMI YEQPVPQEQW HDYAIDVAIN LFEGTDYAGE SKRRNEDGLA ELTNLDIETF FDPNSYPTTK NSFYDLLNEK FPQNRALFFD ENLQPEVDKS GDDIMRGSEN DDSLNSGPGN DKIIGKGGND TLNSGPGNDK IFGQSGDDYL IGRSGNDILL GGKGDDTLEG GIGRDRLNGG PGNDELIGGG SIDFFIFNTN RPFNEEDLGK DIITDFKVDQ DFILLDKSTF DAIESDSSSR KNPGFSRVEE FEVVETDESA ASSEAIIVHS TETGNLFYNQ NGSASGFGTG GDFATVAPEL SSENFILRV
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