Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3498 |
Symbol | |
ID | 4244498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 5395593 |
End bp | 5400188 |
Gene Length | 4596 bp |
Protein Length | 1531 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638108472 |
Product | Cna B-type |
Protein accession | YP_723061 |
Protein GI | 113477000 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.149942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.725774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTATAG ACAACAACAT AGGTGGACAG ACAGTTCCTT TAAATTCTGT CCTGGGTAAT ATTTCTGGTA TCAAGTACAA TGACTTTAAT CGTGATGGCC TTCGGGACGC CTTAGAACCA GGCTTACCAG GAATTACTAT ATATTTAGAT CAAAATAATA ATGGTCAATT AGATCCTGAT GAACTATCAT CAATTAGTGG GGATGATGGT AGCTTTAGTT TTACTAATTT ACCCTTAAAT CAGATTTACA CTCTTCGGGG ATTTGATCAA CCTGGTTTTG TTCAAACTAT CCCAGACCCT ACATTTATTA GTCTGAGCCC AGAAGAACCT AATGTTTCCG GTTTTCTATT TGGTAGCGCT GCAACTGGCC CAGGCGGTAA TATTAGTGGT GTATTATTTA AAGACCTAAA CATTAACGGT ACCCAAGATT CTAATGAACC AATCATTTCT GGGTACGAAG TATTTCTTGA TAGTAATAGA AATGGAGTTT TAGATGAAGG GGAGATTACT AGTGTAACTG ATCAATTTGG TTTTTACTCA TTTACAGGGG TTACATCTAG TCTATTAAAC GTGGATGTAG TCCGTGGACC AAATGAAGCA AGAACAACTC TTAACCCAGT TATCATCTTT ACTGGAACAG AAGAAGAAAT ACCAAACGTA GCTATAGATA TCGGTCTCAT TACTCCTGTT GGTACAGGTA ATGTTCAAGG TGTTAAATAC CTAGACAGTA ATACTAATGG TATGTTTGAT TTGGGGGAAG AAGGTTTACC AAACTTTACT ATCTATGCAG ATATCAATAG TAATAATATT CTAGATCCAA AAGAACCATT TGATGTCACT AACCAGGAGG GTAACTACTT CTTAGCTAAT TTGCCAGCCA CCCGCCTCAA TATTCGCGAA GCAGAGCAAC AACTAAAATT TAATGTAGTA ACCCAACCTC AGACTATGAC TGTTGATGTA CCTATGGGAG GAACCTTACC AGGGGTTAAC TTTGCTAATG CTCAAATCAA TGGTATCTCA GGTATTAATT TCTTAGATAA TAATTCTAAT GGTGCCATTG ATCCAGGAGA TGTAGGTTTA TCTAACTCCA CTGTCTATCT AGACCTAAAT CAAAATGGTA TCTTTGAGCA AAATGAACCT TTTAGAATTA CTGGTCATCA AGGTGAATAT AGTTTTAATA CCTTACCTCC AGGTACTTAC GTTGTCGAAG TAGTGCCCCA ACCTGGTTTT ACTCAAACAG TTCCAGATCC AGTTGTTGCT GTAACAAGTG GCGAAGATAT TAATATTGTT AATATAGGTC AAGTTCCTGA CACTCCTTTA CTTCAAGGTC AATTAAGAGG TAAGAAATTT AACGACTTTA ATTCCAATGG ACTTTTAGAT CCAAGAGAAC CAGGTTTAGC GAATTTTACT TTATATTTAG ACCTGAATGG TAACAATGTA CTAGACGCTA ATGAACCAGC TTCAATATCA AATCCTGCTG GTGACTATAG CTTTGATTCT CTTCCGGTAG GAACTTACTC TTTGAGGGAA ATACCTCAAC CTGGTTTTGT TAAAACTACT CCAGATCAGA GCATTAATAT AGTTGAACCA ATTAACCTTC TACAAGGTGA TCGACCTATT ATATTGAATG TAGGTAATTC TGTGCCAACT ACTCCAGAAC CACTTCCAGC ACCTGCTCCA GAAGCACTTC CAGCACCTGC TCCAGAAGCA GTAGAAGACG GTAACCTAAC TGCTAGCCAA CTAACAGGAA CAGGCAGAAT TGCTGGTACT AAGTTTAATG ATATCAATGG TAACAATGTA ATGGATCCTG AAGAGCCTGG TCTTCCTGGG TTCACTGTTT ATCTAGACCT TAATGATGAC AAAAAGTTAA GTGCGGGTGA ACCTCAGTCT ATGACTGATG TAGAGGGTCG TTATAGCTTT GAGAATATCC CAGCTAATAC TTATCCGATC AAGGTAATTC AGGAACAAGG TTTCAGACAA ATTACTCCCG ATCCAGTAAT TAACTTGACT GAAGGTAACA ATATTAGTTT CGTCAATATT GGTAGCCAAG TTGATGCATC AGTAACACTT CCTCTAAATG CCCCTATGAA TACCTTTGCT TCTGGTACAA TTACTGGGGT TAAATTTGAC GATCGCAATG CTGACGGTTT AGCAGGTCCT GACGAACCAA GACTCATAGA TGTTCAAGTT TTTGTAGACC AAAATGGTAA TGGTTTCCCA GAAGCTAATG AACCAATTAC CCGAACAGAT CCTAACGGGG AATATCGCTT TACATTGCAG CCAGGAAACT TTAGAGTTTT AGAAACACCA CCTGCAGGTT TTGTTAACAC TACTCCTACT CCCCTAGTTC CAGTTGTTCC CGGTCAGACT GTTGTATACA ATTTTGGTGA TACCAGTATC TTTGACCCGA ATACCAGTAT TAGTGGTATC ATCTTTACTG ATAGTAATAA CAATGGAGTC CAAGATTCAG GAGAAGCAGG TATTCCAACT GCTGAAGTTT TCTTAGATAT AGATGGTGAT GGACGACTAG ATAGCCGTGA AGATCTTAAC GGTGACGGGA TAATAAATGA AGGCGAACAA GACATAGATG GCGATGGTGT AGTTGATGTT GACGAAGTTG CAACTTTTAC AGCTCCTGAT GGTCGTTATA CATTTAATGG TGTAACTCCT GCTAATTATA CAATTGGTGT TGTTCAGCAA GAAAACTTAT TCTTAACTGC CACTCGCCCA GTTATTAATG TTACTGTCGG TGAGGTGGTA CCAAACCCTA ATGTATCACC AACTTCGATT AATCTTCCCT TTGGTCAAAG TGTAACTAAT ATTGATGTGG GTGTTAACGT CACATCACCA GAGAAAGATA CTGTTAGTGG TATTGTATTT GCTGACAATA ATGGTAACGG ACTATTTGAA CCTCTAAAAG GGGAAGTAGG TTTACCTGGT GTTGAGGTTT TCTTAGACAC TCACACAGAC GGACAAATAC AAGGCTTTGA ACCAAATCAA CTTAGTGGTC CTGATGGTAC TTATGGTCTA GATGCATCTG GTAAAAAAGG ATCATTTCCC CTACTACAAA TTCTTGATCG TACAGGGTTT GTGCAAACTA CTCCACCAGC AGTAGTAACA GTTGGCGGTG GTCGTAGTGT TGTTTACAAC TTTGGAAACC AACCACAAAC CCTAATTACA GGAAATGTCT TTGAAGACTT TAATAGTAAT GGTATTCAAG ACTTTAATGA TACTAATGTC AATGGCATCC TTGATCCTGA TGAGCGTGTA GAAATGGGTG TACCTCGTTT CCAGGTATAT GTAGATCTAA ATGAGAATGG TATTCTTGAC AACCGAGATA TTGAACCTAA TGCGTTCACA GATACTAACG GAGACTATGC AATTGTTGGT TTGTTGCCTG GTACTTACAC ATTACGACTA ATTCCACCAG ACCCTATTAC AGACCCGAAT GATCCCAACG TGGTTTCACA AAGTTATACT GCTACAACTC CAACAGATCT TCCAATTACG GTTGATGCGT TTGAGAACTC TAACATAGTA ATTAACTTTG GGCAGTCTCC GGTTCTTCCT CCTCCTGATT TTGCTAATAT TTCTGGTATT GCATTTATAG ACGATAACGC TGATGGTCAG GCAGAGGCTG GTGAACTTCA ACTGCCTGAT GTTACTATCT ACATAGATGC TAATGAGAAC GGGGAACGAG ATAGTAATGA GCGGTTTGCT TTAACGGACC AATTTGGTCG CTACGATATC CCGTTTGTAG CTCCAGGAAC TTATGTTGTT CGTCAGGAAG CACAACCAGG TTTCACTGAC TCTAGTACTC CATCTCCTGT TGTAATTACT TTGGCAGCAG GGGACAATGC TGAGTTTGTT AACCTTGCGA ATGCTCCTAC AAATCTCCCG CCTGCTGTGC CTACTACTGC AAATCTTGGT GGTGTTGTTT TCAATGATAT CAATGGTGAT GGCTTGATAG GTCCAGGAGA GAATGGTATT CCTAGTGCTA CTGTATTCCT TGACCGCAAT GATAACTTAA TCCTTGATAA TGAGGAACGT AAGGCGGTTA CAGATTCGTT GGGAGTATAT GATTTTGAGA TACCACCTGG TACTTACAAA GTTCAACAGT TACCATTACC AGGTCTATTC CAAACTGGTC AAAACCCTGT TGTGACACTG TTTGCAGGGG ATGATGCTAA TTTTGTCAAC TTTGGTAATA GCACTACGCC ACAACCAATA TTACCTGTGG CACCGCCACC ACCACCTACA GGTACAGGTA GTATTAGTGG GATAACTTTT GAGGATCTCA ATGCTAATAG TTTGCTAGAT CCTGGTGAAC CTGGTATTGG TGGTGTTGTT CTTTACTTGG ATCAGAATAA CAACTCTATT CAAGATGCTA ATGAAGTACT TGTTGCTAGT GATATCAATG GTAACTATAG CTTCCCTGGT TTGGCAGATG CTGGTTATAC AATTCGTCAG GACTTAAACC CAGAGCAGAG CGCTATCTTT AATCAAACTG CTCCCCCTTC TGGTCAAGCA AGTTTGATCA ACGTATCTGG TGGTCAAAAT GTTTCTGATG TGAATTTTGG TAATGCCCGT GTATAA
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Protein sequence | MSIDNNIGGQ TVPLNSVLGN ISGIKYNDFN RDGLRDALEP GLPGITIYLD QNNNGQLDPD ELSSISGDDG SFSFTNLPLN QIYTLRGFDQ PGFVQTIPDP TFISLSPEEP NVSGFLFGSA ATGPGGNISG VLFKDLNING TQDSNEPIIS GYEVFLDSNR NGVLDEGEIT SVTDQFGFYS FTGVTSSLLN VDVVRGPNEA RTTLNPVIIF TGTEEEIPNV AIDIGLITPV GTGNVQGVKY LDSNTNGMFD LGEEGLPNFT IYADINSNNI LDPKEPFDVT NQEGNYFLAN LPATRLNIRE AEQQLKFNVV TQPQTMTVDV PMGGTLPGVN FANAQINGIS GINFLDNNSN GAIDPGDVGL SNSTVYLDLN QNGIFEQNEP FRITGHQGEY SFNTLPPGTY VVEVVPQPGF TQTVPDPVVA VTSGEDINIV NIGQVPDTPL LQGQLRGKKF NDFNSNGLLD PREPGLANFT LYLDLNGNNV LDANEPASIS NPAGDYSFDS LPVGTYSLRE IPQPGFVKTT PDQSINIVEP INLLQGDRPI ILNVGNSVPT TPEPLPAPAP EALPAPAPEA VEDGNLTASQ LTGTGRIAGT KFNDINGNNV MDPEEPGLPG FTVYLDLNDD KKLSAGEPQS MTDVEGRYSF ENIPANTYPI KVIQEQGFRQ ITPDPVINLT EGNNISFVNI GSQVDASVTL PLNAPMNTFA SGTITGVKFD DRNADGLAGP DEPRLIDVQV FVDQNGNGFP EANEPITRTD PNGEYRFTLQ PGNFRVLETP PAGFVNTTPT PLVPVVPGQT VVYNFGDTSI FDPNTSISGI IFTDSNNNGV QDSGEAGIPT AEVFLDIDGD GRLDSREDLN GDGIINEGEQ DIDGDGVVDV DEVATFTAPD GRYTFNGVTP ANYTIGVVQQ ENLFLTATRP VINVTVGEVV PNPNVSPTSI NLPFGQSVTN IDVGVNVTSP EKDTVSGIVF ADNNGNGLFE PLKGEVGLPG VEVFLDTHTD GQIQGFEPNQ LSGPDGTYGL DASGKKGSFP LLQILDRTGF VQTTPPAVVT VGGGRSVVYN FGNQPQTLIT GNVFEDFNSN GIQDFNDTNV NGILDPDERV EMGVPRFQVY VDLNENGILD NRDIEPNAFT DTNGDYAIVG LLPGTYTLRL IPPDPITDPN DPNVVSQSYT ATTPTDLPIT VDAFENSNIV INFGQSPVLP PPDFANISGI AFIDDNADGQ AEAGELQLPD VTIYIDANEN GERDSNERFA LTDQFGRYDI PFVAPGTYVV RQEAQPGFTD SSTPSPVVIT LAAGDNAEFV NLANAPTNLP PAVPTTANLG GVVFNDINGD GLIGPGENGI PSATVFLDRN DNLILDNEER KAVTDSLGVY DFEIPPGTYK VQQLPLPGLF QTGQNPVVTL FAGDDANFVN FGNSTTPQPI LPVAPPPPPT GTGSISGITF EDLNANSLLD PGEPGIGGVV LYLDQNNNSI QDANEVLVAS DINGNYSFPG LADAGYTIRQ DLNPEQSAIF NQTAPPSGQA SLINVSGGQN VSDVNFGNAR V
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