Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3406 |
Symbol | |
ID | 4244443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 5214314 |
End bp | 5215996 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638108390 |
Product | SSS family solute/sodium (Na+) symporter |
Protein accession | YP_722980 |
Protein GI | 113476919 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.210868 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCAG AAGTATGGAC ATTGATTTTT GTGGCTGTTT CCTTTACAGG TTATCTCTAT ATTGGATGGC GATCGCGAGT CAAAGATAGT AAAGGTTTTT TTGTAGCGGA CCAAAGTGTA CCTGCTATTG CTAATGGTGC TGCTACTGGA GCGGACTGGA TGTCTGCGGC CTCATTTATT TCAATGGCAG GGTTAATTTC TTTTTTAGGT TATGATGGTT CGATCTATCT TATGGGATGG ACTGGTGGTT ATGTACTATT AGCATTACTA CTCGCTCCAT ACCTGCGGAA GTTTGGCAAA TATACAGTAC CTGACTTTGT AGGCGATCGC TACTACTCAA ATGTTGCCCG TATAGTTGCA GTTATCGCTG CTATCTTCGT ATCAATGACT TACGTTGCGG GGCAAATGCG GGGTGTTGGT ATTGTCTTCA GTCGGTTTTT ACAAGTTGAC ATTGGTACCG GCGTTTTCAT TGGGATGATT ATAGTTGCTT TTTTTGCCAT CTTAGGTGGG ATGAAAGGTA TCACTTGGAC TCAGGTTGCC CAATATACTG TACTTATTAT TGCTTATCTG ATTCCAGCTA TTGCTATTGC TACAGTTATT ACTGGTATTC CTATACCTCA ATTTGCTTTT ACTTTCAGCG ATATTGTGGA AAAACTCAAT CAAGTTCAGG TAGATTTGGG TTTTGCAGAA TATACCGCAG CTTTTAGCAA CAAAACTATG CTTGATGTTT TGTTTATCAC TATTGCGTTG ATGGTGGGAA CTGCTGGTTT ACCTCATGTT ATTGTTCGCT TTTACACCGT GCCTGATGTA AGAGCTGCCA GATATTCTGC CGGTTGGGCA TTATTATTTA TTGCTATTTT GTATACAACT GCTCCTGCCT TAGCTACTTT TGCGCGATAC AACTTAATTG ATAGTTTACA CGATAAAACT GTGGAGGAAG TTCAACAGTT AAACTGGGCG ACAAAGTGGG AAAATACGGG TTTGTTAGAA TTTACTGATA AAAATAATGA TGGTCGCTTT CAACTCACCC CAGATAAAGA AACTAATGAA ATTAAAATAG ACCGGGATAT TATTGTTTTG TCTACCCCAG AAGTAGCTAA ACTTGCTCCT TGGGTAATTG CTTTAGTAGC AGCGGGAGGC TTGGCTGCTG CTTTGTCTAC AGCATCAGGT TTGTTGTTGG TAATTTCTAG TTCCATTGCC CATGATGTTT ACTATCGAAT GATCGATCCA GGAGCACCGG AGTCACGACG GTTAATTGTA GGACGGATGA TGGTAGGATT TTCTATTGCT ATTGCTGGTT ACTTTGGGGT TAACCCACCA GGGTTTGTTG CTCAGGTGGT AGCTTTTGCT TTTGGTTTGG CTGCAGCTAG TTTTTTCCCG GTGATTATTT TAGGTGTTTT TGATAAACGC ACTAACCGGG AAGGAGCGAT CGCTGGTATG GTAGTAGGTT TATTGTTTAC TACTATTTAT ATTGTAGGTG TCAAGTTTGC GGGAATGCCG ACATGGTTTT TCGGGGTTTC TGCTGAAGGT ATTGGCACTG TGGGGATGGC GTTAAATTTT ATTGTGACTT TTATAGTATC TCGGATGACA CCTCCTCCAC CTTTGGAAAT ACAAGAGATG GTAGAGAATT TACGATCGCC TCTAGCTGTG GCTGTTCCCA TTAGGGATAT TGGTGAGGAA TAG
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Protein sequence | MSAEVWTLIF VAVSFTGYLY IGWRSRVKDS KGFFVADQSV PAIANGAATG ADWMSAASFI SMAGLISFLG YDGSIYLMGW TGGYVLLALL LAPYLRKFGK YTVPDFVGDR YYSNVARIVA VIAAIFVSMT YVAGQMRGVG IVFSRFLQVD IGTGVFIGMI IVAFFAILGG MKGITWTQVA QYTVLIIAYL IPAIAIATVI TGIPIPQFAF TFSDIVEKLN QVQVDLGFAE YTAAFSNKTM LDVLFITIAL MVGTAGLPHV IVRFYTVPDV RAARYSAGWA LLFIAILYTT APALATFARY NLIDSLHDKT VEEVQQLNWA TKWENTGLLE FTDKNNDGRF QLTPDKETNE IKIDRDIIVL STPEVAKLAP WVIALVAAGG LAAALSTASG LLLVISSSIA HDVYYRMIDP GAPESRRLIV GRMMVGFSIA IAGYFGVNPP GFVAQVVAFA FGLAAASFFP VIILGVFDKR TNREGAIAGM VVGLLFTTIY IVGVKFAGMP TWFFGVSAEG IGTVGMALNF IVTFIVSRMT PPPPLEIQEM VENLRSPLAV AVPIRDIGEE
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