| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3385 |
|---|
| Symbol | |
|---|
| ID | 4244422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 5189811 |
|---|
| End bp | 5191265 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638108369 |
|---|
| Product | F0F1 ATP synthase subunit beta |
|---|
| Protein accession | YP_722959 |
|---|
| Protein GI | 113476898 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAGCA CCTTAGAAAA AACAAACGTA GGATCTATTA CTCAAATTAT TGGTCCAGTA
GTAGATGTTA AGTTTCCTAG TGGAAATCTT CCAGAAATCT ACAACGCCTT AACAATTACA
GCTAAAAATG AAGCTGGACA AGATGTATCC GTGACCTGTG AAGTACAACA ACTTCTAGGG
GATAACCAAG TCCGAGCTGT GGCCATGAGT GCTACAGATG GCCTAGTGCG TGGCATGGAA
GTAGTAGATA CCCGTGCAGC AATTAGTGTA CCAGTAGGAA ATGCCACCCT TGGTAGAATA
TTTAATGTTG TCGGTGAACC AGTAGATGAA TTAGGTCCAG TTGGTACTGA AGACAAATCT
CCTATTCACC GTGAAGCTCC TAAACTAGTA GATCTAGAAA CTCAGCCTTC GGTATTTGAA
ACAGGTATTA AAGTTGTAGA CCTACTTGCC CCTTATCGTC GTGGTGGAAA AATTGGGCTA
TTTGGTGGTG CTGGTGTAGG TAAAACCGTT ATCATCATGG AATTAATTAA CAACATCGCT
AAAGCTCACG GTGGAGTATC CGTTTTTGGT GGTGTGGGAG AGCGGACTCG TGAAGGTAAT
GACCTTTACA ATGAGATGAT TGAGTCCAAA GTAATTAACC CAGAAAACCT TAGTGAATCT
AAAGTGGCTC TGGTTTATGG TCAGATGAAT GAACCACCAG GAGCTAGGAT GCGTGTTGGT
CTTTCAGCTT TGACAATGGC AGAATATTTC CGGGATGTTA GTAAGCAAGA CGTACTACTA
TTTATTGATA ATATCTTCAG ATTTGTACAA GCCGGTTCTG AAGTATCTGC TCTTTTAGGA
AGAATGCCTT CTGCGGTGGG ATATCAACCT ACCCTTGGTA CAGAGATGGG TGAATTGCAA
GAACGAATTA CTTCTACAAA AGAAGGTTCT ATTACTTCTA TTCAAGCTGT GTATGTACCT
GCGGATGACT TGACAGATCC CGCACCTGCT ACTACTTTTG CTCATCTAGA TGCTACAACA
GTATTATCAA GGGGTCTTGC TTCTAAGGGA ATCTATCCAG CAGTTGACCC CTTAGATTCT
ACATCTACTA TGTTACAACC AAGTGTAGTT GGTAAAGAAC ACTATGATGT TGCTCGTGCA
GTACAATCTA CTCTACAAAG ATACAAAGAA CTTCAAGATA TTATCGCTAT TCTTGGTTTA
GATGAATTAT CAGAAGATGA CCGTCTGGTT GTAGCTCGTG CTCGTAAAAT TGAGCGCTTT
TTATCACAAC CATTCTTTGT AGCTGAAGTA TTTACCGGTT CTCCTGGTCA ATATGTGAAG
TTAGAAGATA CTATGAAAGG TTTCAAAATG ATTTTATCTG GTGAACTTGA CGATTTACCA
GAGCAAGCTT TCTACATGGT AGGTGGTATT GACCAGGTAA TTGCCAAAGC TGAAAAACTT
AAAGCAGAAG CATAG
|
|---|
| Protein sequence | MVSTLEKTNV GSITQIIGPV VDVKFPSGNL PEIYNALTIT AKNEAGQDVS VTCEVQQLLG
DNQVRAVAMS ATDGLVRGME VVDTRAAISV PVGNATLGRI FNVVGEPVDE LGPVGTEDKS
PIHREAPKLV DLETQPSVFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV IIMELINNIA
KAHGGVSVFG GVGERTREGN DLYNEMIESK VINPENLSES KVALVYGQMN EPPGARMRVG
LSALTMAEYF RDVSKQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP TLGTEMGELQ
ERITSTKEGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLASKG IYPAVDPLDS
TSTMLQPSVV GKEHYDVARA VQSTLQRYKE LQDIIAILGL DELSEDDRLV VARARKIERF
LSQPFFVAEV FTGSPGQYVK LEDTMKGFKM ILSGELDDLP EQAFYMVGGI DQVIAKAEKL
KAEA
|
|---|
| |