Gene Tery_3301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3301 
Symbol 
ID4243607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5062119 
End bp5064692 
Gene Length2574 bp 
Protein Length857 aa 
Translation table11 
GC content40% 
IMG OID638108289 
Productrecombination and DNA strand exchange inhibitor protein 
Protein accessionYP_722880 
Protein GI113476819 
COG category[L] Replication, recombination and repair 
COG ID[COG1193] Mismatch repair ATPase (MutS family) 
TIGRFAM ID[TIGR01069] MutS2 family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0896287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0130312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTCAAT CTGAGACGTT AGAATTACTA GAATGGCCTC GCTTGTGTCA ACATTTGGCC 
ACTTTTACAG GTACCAAATT GGGTGCAGTT ACAGCTAGTC ATTTATCAAT TCCGTTAACA
AGGACGGAGA CAATACATTT ATTAGCTCAA ACTCAGGAAG TATACAAACT AGAAACTCTT
CTGGTGCAGG GCTTGTCTTT TGATGGAATT GAAGATATCA GTGGTTCCCT CAAAAGATCA
GAATTAGGTG GTATACTTTC TGGATATGAA CTTTTAGCTA TTGCTACAAC TCTGGCAGGT
GTTCGTAAGT TGCGTCGGGC AATTGATAGT TATGAGTCAG AATATGAGCT GTCAGTTTTG
CCGGAATTGG TGGCGGATAT GCGGACTTAT CCAGAGTTAG AACAAGAAAT TCATCGTTGT
ATAGATGACC GGGGAGATGT TACGGATAGA GCTAGCCCTA AATTGGCAGG AATTCGTGAA
AAAATACACC GCCTACGCGA TCGTATTGAC AATATTCTCC GAGGAATTTT ACAACGGAAA
GCTAATGCTA TTCAACAACC AATTATTACT CAACGCGACG ATCGCTTTGT AATTCCTGTT
AAAGCTCCTC AAAAAGATGC TGTACCTGGT ATTGTTCATG ATACGTCTAC GACTGGTTCT
ACACTATACA TTGAACCTAA TGCAGTTGTC AACCTGAATA ATCAAATGCG ACAACTGCAA
CGTCAAGCTC AAAGAGAAGA AGAAGCTATT CGGCAAGCTT TAACTCAGAA GGTGGCAGAA
GTTAAGGAGG ATTTAGATCA GCTGTTGGCA ATTACTACTA TTATTGACCT AGCTACAGCT
CGGGCTCGTT ATAGTTTATG GTTGGAAGCT ACACCACCTC AATTTACTGA CCTAGACTCT
GAGCAACCTA TGACTATGGG TCAATTACGA CATCCTTTAC TGGTATGGCA ACAGCAGTAT
GAACAAAAAA ATTCGGTAGT ACCTATTGAT GTGAAGGTTA GACCTCCAGT GAGAGTGGTA
GCAATTACGG GTCCTAATAC TGGTGGTAAG ACTGTGACTC TGAAAACTCT GGGATTAGCT
GCACTTATGG CAAAAGTGGG ATTATTTATT CCTGCTAATG ATCCTGTAAA GTTACCTTGG
TTTGAGCAAA TATTGGCTGA TATTGGTGAT GAGCAGTCTT TGGAGCAAAG TTTATCTACT
TTTTCTGGTC ATATTCGGCG AATTATTAGA ATTTTAGAAG CTATAGATGT TAGTAAGGCA
AATATAATAA GTCAAAAGTT AAAAGTTAAA ACTCAAAACT CAAAGGTAAT AGACTCGGAT
GATTTTTCTG AGAATGAAAA TAATTCGGAA ATTGATAATT TGTCTGGGAA TGAAAATCTG
GAAAGTTCTA ATTTATCGTC TACTCTGGTT TTGTTGGATG AAGTTGGTGC TGGTACTGAC
CCTACTGAAG GTAGTGCTTT AGCAATTTCT TTATTGCAAT ATTTGGCAGA TAATGCACTA
TTAACAGTGG CAACTACTCA CTTTGGAGAG TTGAAGGCTC TTAAATATGA AGATGAACGG
TTTGAAAATG CTTCAGTCGA ATTTGATAGT AATTCCTTAC AACCAACTTA TCGTTTACTA
TGGGGAATTC CTGGGCGGTC TAATGCTATG ACTATTGCTG GTAGGTTGGG TTTAAAACAG
GATATTATTG ATAGGGCGCA AGATTATGTT GGGGACAGTT CTGAGGATGT GAATCAAGTA
ATTGCAGGTT TGGAGGAGCA AAGACAAAAG CAGGAAACTA AGGCTAAGGA AGCGTCTGCA
TTATTACAGG AAACTGAGTC TTTACATCAG GAAGTTGCCC GAAAAGCTTC TGCTCTCAAG
GAACGGGAAC GGGAATTAAA GTTGGCGCAG GAGGTGGCAG TACAAGAAAA AATTGCTGAG
GCAAAAGCAG AAATAGCAAG GGTAATTCGG AATTTGCAAC AGGGTCCCCT GACTGCTAGA
AATGCTCAGA AAGCCACTAA TGCTATTAAT GAAATTTCTG AGAAATATTT GCCTTCTGCT
ACTCCCCCAC CAAAGAAACC AGGTTTTATG CCAAAGGAGG GCGATCGCAT TAGAATTCCG
AAAATTGGTC AAATTGCTGA GGTTTTGAGC GCTCCTAATG AAAATGATGA GTTGACTGTT
AAGTTTGGGG TGATGAAAAT GACGGTTAAT TTGAGGGAGG TTGAGTCTCT TGATGGTGAG
AGGGTTGAGT CTTTTAAGAA GAATAAAAAT TTGGAGTCTC AAAGGAGCAA GAAGGTAGAA
AGTAAGTCTA AGGAAACTCC GCCGAAAGTA AGTTCTAATG GTTTGGCTGT TCGTACTTCT
CAAAATAGTA TTGATATTCG TGGCAGTCGG GTTGCGGATG CTCAATTTGA AGTTGATAGG
GCGTTATCGA AAGCGATCGA ATATGGTTTG TTGTGGATTA TTCATGGTAA GGGTACTGGT
AAGTTGAGGC AGGGTATCCA TGAATTTTTG CAGGAACATC CGTTGGTGGA ACGTTATGAA
TTAGCTGCTA GAAATGATGG AGGTAGTGGG GTGACTATTG CTCATTTGAA GTAG
 
Protein sequence
MIQSETLELL EWPRLCQHLA TFTGTKLGAV TASHLSIPLT RTETIHLLAQ TQEVYKLETL 
LVQGLSFDGI EDISGSLKRS ELGGILSGYE LLAIATTLAG VRKLRRAIDS YESEYELSVL
PELVADMRTY PELEQEIHRC IDDRGDVTDR ASPKLAGIRE KIHRLRDRID NILRGILQRK
ANAIQQPIIT QRDDRFVIPV KAPQKDAVPG IVHDTSTTGS TLYIEPNAVV NLNNQMRQLQ
RQAQREEEAI RQALTQKVAE VKEDLDQLLA ITTIIDLATA RARYSLWLEA TPPQFTDLDS
EQPMTMGQLR HPLLVWQQQY EQKNSVVPID VKVRPPVRVV AITGPNTGGK TVTLKTLGLA
ALMAKVGLFI PANDPVKLPW FEQILADIGD EQSLEQSLST FSGHIRRIIR ILEAIDVSKA
NIISQKLKVK TQNSKVIDSD DFSENENNSE IDNLSGNENL ESSNLSSTLV LLDEVGAGTD
PTEGSALAIS LLQYLADNAL LTVATTHFGE LKALKYEDER FENASVEFDS NSLQPTYRLL
WGIPGRSNAM TIAGRLGLKQ DIIDRAQDYV GDSSEDVNQV IAGLEEQRQK QETKAKEASA
LLQETESLHQ EVARKASALK ERERELKLAQ EVAVQEKIAE AKAEIARVIR NLQQGPLTAR
NAQKATNAIN EISEKYLPSA TPPPKKPGFM PKEGDRIRIP KIGQIAEVLS APNENDELTV
KFGVMKMTVN LREVESLDGE RVESFKKNKN LESQRSKKVE SKSKETPPKV SSNGLAVRTS
QNSIDIRGSR VADAQFEVDR ALSKAIEYGL LWIIHGKGTG KLRQGIHEFL QEHPLVERYE
LAARNDGGSG VTIAHLK