Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2458 |
Symbol | cobS |
ID | 4244642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3782982 |
End bp | 3783746 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638107543 |
Product | cobalamin synthase |
Protein accession | YP_722143 |
Protein GI | 113476082 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0368] Cobalamin-5-phosphate synthase |
TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACTAA TTAGAGAAAC TCTTGCCAAG TTCATGGCTG GAATTGCTTT TTACACCTGT TTACCAATTC CCCATGATTG GAATTTAGAT TTTCACGGTA TTGCTCGTTT AGCTCCATTG ATCGGATTGA TACTTGGAGG TATTCAAGGT TTAGTAGATA TAGGATTACA TTCTTTAGGA ATGCCTGTAC TCACTAGATC AACTGTAGTG ATTATATCTG GAATTGCTTT AACTGGCGGT TTACATTTGG ATGGGGTAAT GGATGCTGCT GATGGGTTAG CGGTACCAGA AAAAAAACGA AGACTCGAAG TAATGACAGA TAGCGCTACA GGAGCTTTTG GTGCAATGGC AGCGATCGCT CTACTACTCA TCAAAATTAC AGCTTTAACA GATTTAGACA GCGATCGCCT TTTAATACTA ATGGGAATAG CAGGTTGGGG GAGATGGGGT CAGTTAGTAG CGATCGCTTG TTACCCCTAT CTTAAACCTA CTGGAAAAGG AGCATTTCAC AAAAAAGCAA AATATTCTAT TTTGGATTTT TTACTAGGAA TACTCTTATT ACTGCTTATG AGTGGAATTC TTACTTTATT AGATCCTCAA AATTGGTTGG TAGCTTGTGG AATGGCAATA GGAGGAATAG CGATCGCTCT ACTAACAGGT GCTTGGTTTA ACCGTTATTT GGGCGGTCAT ACTGGCGACA CTTACGGCGC TGTAGTTGAA TGGACAGAAG CATTATTACT ATGCGTTGTA GTTACTTTAG AATAA
|
Protein sequence | MQLIRETLAK FMAGIAFYTC LPIPHDWNLD FHGIARLAPL IGLILGGIQG LVDIGLHSLG MPVLTRSTVV IISGIALTGG LHLDGVMDAA DGLAVPEKKR RLEVMTDSAT GAFGAMAAIA LLLIKITALT DLDSDRLLIL MGIAGWGRWG QLVAIACYPY LKPTGKGAFH KKAKYSILDF LLGILLLLLM SGILTLLDPQ NWLVACGMAI GGIAIALLTG AWFNRYLGGH TGDTYGAVVE WTEALLLCVV VTLE
|
| |