Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2439 |
Symbol | |
ID | 4244623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 3759539 |
End bp | 3760330 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638107527 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_722127 |
Protein GI | 113476066 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.892644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAG CTAAAACCCT AAAAAGAAAC TTAGAAAATC CTGAGCCATT TTTAAGCGTA GCATGGGATA CAAACGATAT ACCAGACCTA TGTAGTGTCA ATCCTAACCT TAAATGGAAA GACATTAACT GGAAAAAGGT AGAAAAATAT GTATTTAAGT TGCAAAAGTT AATTTACAGA GCATCCAGCC GTGGCGAAAT CCGCAAAATG CGTAAGTATC AAAAACTTCT GACCAAAAGT TATTATGCTA GGTTGCTAGC TGTTAGGCGT GTGACGCAAG ACAACCAGGG AAAGAAAACA GCGGGTATAG ACGGTATAAA AAGTCTTCCC CCAATGCAAA GATTTAACTT GGTAGAAATG TTAAGGTCAC GATATCTTAA AGCAAGCCCA ACCCGTAGAG TCTGGATACC AAAACCAGGT AGAGAAGAAA AACGTCCACT AGGCATACCT ACCATGTATG ATAGGGCCCT TCAAGCACTG GTAAAGTTAG GTATGGAACC AGAATGGGAG GCACTTTTTG AGCCTAATAG CTATGGTTTT AGACCAGGTC GGTCAGCACA TGATGCCATT GAAGCCATCT ATAAAAGCAT CAACAAAAAA TCAAAATATG TTTTAGATGC TGACATATCC AAATGTTTTG ACCAAATTAA CCATGGTGCA CTGTTGAGAA AAATAGGAAA ATCTCCATAC AGACGATTAA TCAAACAATG GTTAAAATCT GGAGTGTGTG ACAACAAACA ATTCTCAAAC ACTGTGGAAG GTACGCCACA GGGAGGGGTT ATCTCACCCT GA
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Protein sequence | MNKAKTLKRN LENPEPFLSV AWDTNDIPDL CSVNPNLKWK DINWKKVEKY VFKLQKLIYR ASSRGEIRKM RKYQKLLTKS YYARLLAVRR VTQDNQGKKT AGIDGIKSLP PMQRFNLVEM LRSRYLKASP TRRVWIPKPG REEKRPLGIP TMYDRALQAL VKLGMEPEWE ALFEPNSYGF RPGRSAHDAI EAIYKSINKK SKYVLDADIS KCFDQINHGA LLRKIGKSPY RRLIKQWLKS GVCDNKQFSN TVEGTPQGGV ISP
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