Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2144 |
Symbol | |
ID | 4244117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3348503 |
End bp | 3349204 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638107251 |
Product | RNAse III |
Protein accession | YP_721851 |
Protein GI | 113475790 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGATA AAATACCTGA GTTTAAAAAT CAAAAACTTC TTCAACAAGC TCTAACCCAT CGTTCCTATT TAAACGAAAA TTATGGAGAT GAGGAAGACA ACGAAAGTCT AGAATTTATC GGCGATGCTT TACTAGGTTT CTTAGTAGGA GAATTGCTAT ATAGAAGATA CAAAGAAGAG CATAATCTCA AACCCAAAGA ACTTACTCGG ATCCGTTCAC TTTTAGTAGA TGAAAAACAA TTAGCAAAGT TCGCAGTTCA ATTGGGAATT GGTGCAAAAA TGCGCTTAGG TAAAGGTGCG GAAAAAGATG GTGGAAGGAA AAATCCAGCT TTACTAAGTG ACACTTTTGA AGCAATAATT GGAGCCTATT TTTTGGACTC AAATTTAACG AAAGTTAAAC CTTTTATTAA AAGGCTTTTT GAACCTGTTG CAGATAATAT AATTTTGCCT AATTATGGTG ATAATTCACA ACCAAAAGAT TTAGTAGATA CTAAGGGTAA ATTTCAACAG TGGGCACTCG CAAAATTTGG AGAAAATCCT AGATATGAAT CTAATAATGG AGAAGGTTTA GATCATGCTA AAATATTTAC TGCGGAAGTT AGAGTTAGAG GAAAATTATA TGGTGTTGGT AAAGGAAATC GTAAACAAGA AGCAGAAAAA AGTGCGGCAG AAAAAGCTCT GAAAAAAGTA GGGTTAATTT GA
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Protein sequence | MIDKIPEFKN QKLLQQALTH RSYLNENYGD EEDNESLEFI GDALLGFLVG ELLYRRYKEE HNLKPKELTR IRSLLVDEKQ LAKFAVQLGI GAKMRLGKGA EKDGGRKNPA LLSDTFEAII GAYFLDSNLT KVKPFIKRLF EPVADNIILP NYGDNSQPKD LVDTKGKFQQ WALAKFGENP RYESNNGEGL DHAKIFTAEV RVRGKLYGVG KGNRKQEAEK SAAEKALKKV GLI
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