Gene Tery_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2144 
Symbol 
ID4244117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3348503 
End bp3349204 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content34% 
IMG OID638107251 
ProductRNAse III 
Protein accessionYP_721851 
Protein GI113475790 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGATA AAATACCTGA GTTTAAAAAT CAAAAACTTC TTCAACAAGC TCTAACCCAT 
CGTTCCTATT TAAACGAAAA TTATGGAGAT GAGGAAGACA ACGAAAGTCT AGAATTTATC
GGCGATGCTT TACTAGGTTT CTTAGTAGGA GAATTGCTAT ATAGAAGATA CAAAGAAGAG
CATAATCTCA AACCCAAAGA ACTTACTCGG ATCCGTTCAC TTTTAGTAGA TGAAAAACAA
TTAGCAAAGT TCGCAGTTCA ATTGGGAATT GGTGCAAAAA TGCGCTTAGG TAAAGGTGCG
GAAAAAGATG GTGGAAGGAA AAATCCAGCT TTACTAAGTG ACACTTTTGA AGCAATAATT
GGAGCCTATT TTTTGGACTC AAATTTAACG AAAGTTAAAC CTTTTATTAA AAGGCTTTTT
GAACCTGTTG CAGATAATAT AATTTTGCCT AATTATGGTG ATAATTCACA ACCAAAAGAT
TTAGTAGATA CTAAGGGTAA ATTTCAACAG TGGGCACTCG CAAAATTTGG AGAAAATCCT
AGATATGAAT CTAATAATGG AGAAGGTTTA GATCATGCTA AAATATTTAC TGCGGAAGTT
AGAGTTAGAG GAAAATTATA TGGTGTTGGT AAAGGAAATC GTAAACAAGA AGCAGAAAAA
AGTGCGGCAG AAAAAGCTCT GAAAAAAGTA GGGTTAATTT GA
 
Protein sequence
MIDKIPEFKN QKLLQQALTH RSYLNENYGD EEDNESLEFI GDALLGFLVG ELLYRRYKEE 
HNLKPKELTR IRSLLVDEKQ LAKFAVQLGI GAKMRLGKGA EKDGGRKNPA LLSDTFEAII
GAYFLDSNLT KVKPFIKRLF EPVADNIILP NYGDNSQPKD LVDTKGKFQQ WALAKFGENP
RYESNNGEGL DHAKIFTAEV RVRGKLYGVG KGNRKQEAEK SAAEKALKKV GLI