Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2092 |
Symbol | |
ID | 4243926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 3263487 |
End bp | 3265649 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638107201 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_721804 |
Protein GI | 113475743 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.467729 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAGC AAAACATAAC AAAAGTTTCT ATAGTAATAG TCGCTTCTGT TAGCGCTCTG TTATCGGGGG TTTTTCTGGT ACAATTTACT AGCAATAACG AAAACTCCCA AAAGACTACC CAAAAAGAAA AACTTAATCA AGAGTTAAAT GTAGTAAGTT TTGTGTCACT GCAACCAGAG GAACGTCGTC GTAGGTTGGA AACTGCGATC AAAACTGGAA AATCTCTCAA CACTAGTCGT GCTCGTTATG TTCTAGCTAA TGATTTAATT CAACAGGGAG AGGCTGAGTT GGCGATCGCT CAACTGAAAG ATTTAGAAAA AGAATATATA ACTCTAGCAC AATATATTCT AGTTAAACGA GCGCAAGCTT ACGAACAAAT AGGGGATACA GACAAAGCAA AAAGAGTTTG GCAAGAAGTT TTAAGATACG ATCCACAAGA AGCTGTGGTG GTAGAAGCTT TGTATATACT AGGAAAAGAA AACCCGGAAT ACTGGGATGA GGCGATCGCT AAATTTCCTG GTTATCCAGC TACAGTTAAA ATTGCTCAGG AAAAATTAAA GCAAAATCCT AATCAACCTC GGTTATTATT GCTTATTGCT AAGTATGGTT TTCATGTGCC TGAATATAGC ACGGTATTAG AACAACTTAG AACAAAATAT GCTTCTGAGT TGACTCCCGA AGATTGGGAA ATGGTTGCTT TTGGGTATTG GGAAAAACAA GATTATGGTA AAGGTGCCTT AGCATATCAG AAAGCAACCA AGACTCCCCA AAATTTATAT CGTTATGCCA GGGGCTTATG GTTAGGAGGA AAAATCAAAG AATCTCGCGA AGCTTATAAA ACTTTAATTA ATACATTTCC TAATGGCGGA GAAGATACAG CTTTGGGTTT AATTCGTTTG TCGAGGTTAG TTGATCGAAA AGATGCTATA CCTTATCTTG ACAGGGTAAT TGTTAACTTC CCCAGTTTAG CACCCGAAGC ATTGTTAGAT AAGTCTAAGT TGCTTGATAA ACTTGACTCT ACTAAGTCAG CTTCTCTGTT ACGTCAACAA TTGTTGAGAG AATATAGTAA TTCTGATGCT GCGGCTATAC TACGCTGGAA GTTAGCTGAA CAAGCTGCCG CAGGTGGTAA TTTACAAGTG GCTTGGAAGT GGGCGCAAGA GTTGACTGTG AATAATCCTG ATCATAAGTT GGCAGCGCAA GCAGGTTTCT GGGTAGGTAA GTGGGCACAA CAACTTGGGC GGACAGAGGA TGCCACAAAA GCTTTTGAGT ATATGATTTT ACGATATCCT CACTCTTATT ATGCTTGGCG ATCGGCAGTG ATGCTAGGTT GGCCTGTAGG GGATTTTACG ACAGTTAGGA ATTTATCTCC AGAGGTTGTA CAAAGGAAAG ACCGTGAACC ACTGCCTTTT GGTTCTGAAA CATTGCGGGA ACTATATCAG ATTGGACAAG ACTGGGATGC TTGGAAACAG TGGCAAGTAG AATTTAAAGA CCGCATGAAT CCAACTGTCG CTCAACAGTA TACTGATGGC GTATTGAGGG TTGGTGTGGG GGATAATTTG GATGGTATTT GGATGCTAAC TAGCTTGAGT AAATGGGAAT CTCCAGAGGA GATAGCTGAG TATAAAGCTT TAAAAGAAAA GTCTACTTAT TGGCAAACTT TGTATCCTTT TCCTTATTTG GAAACTATTG TTAAATGGTC TAATAAACGA AAACTAAATA CTGTTTTGGT GACTGCTTTA ATTCGTCAAG AATCTCGTTT TATGCCAAAC ATCAAATCAG TTGTGGGAGC AACAGGACTA ATGCAGATAA TGCCACAAAC TGGTAAAGAG GCTGCTAAGA AAATTAATCT TGTTAGTTAT GATTTAGAGA ATATTAATGA TAATGTTAAT TTAGGTACTT ATTACTTGGA TTTTACTCAT AAAAAGTATA AGAATAATTC AATGTTGGCA ATTGCTAGTT ATAATGCCGG TCCGAATGCT ATAAATAGTT GGTTAAAACG TTTTGGGTTT GATGATGCTG ATGCTTTTGT GGAGAAAATT CCTTATCCAG AAACAAGGGG TTATGTGGAG TCTGTCTTTG AAAATTATTG GAATTATTTG CAGATTTATA ACCCTGAAGT TTCTCAGTTA ATGGAAAAAC ATTATGCTAA ATATAATCAA TAA
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Protein sequence | MLKQNITKVS IVIVASVSAL LSGVFLVQFT SNNENSQKTT QKEKLNQELN VVSFVSLQPE ERRRRLETAI KTGKSLNTSR ARYVLANDLI QQGEAELAIA QLKDLEKEYI TLAQYILVKR AQAYEQIGDT DKAKRVWQEV LRYDPQEAVV VEALYILGKE NPEYWDEAIA KFPGYPATVK IAQEKLKQNP NQPRLLLLIA KYGFHVPEYS TVLEQLRTKY ASELTPEDWE MVAFGYWEKQ DYGKGALAYQ KATKTPQNLY RYARGLWLGG KIKESREAYK TLINTFPNGG EDTALGLIRL SRLVDRKDAI PYLDRVIVNF PSLAPEALLD KSKLLDKLDS TKSASLLRQQ LLREYSNSDA AAILRWKLAE QAAAGGNLQV AWKWAQELTV NNPDHKLAAQ AGFWVGKWAQ QLGRTEDATK AFEYMILRYP HSYYAWRSAV MLGWPVGDFT TVRNLSPEVV QRKDREPLPF GSETLRELYQ IGQDWDAWKQ WQVEFKDRMN PTVAQQYTDG VLRVGVGDNL DGIWMLTSLS KWESPEEIAE YKALKEKSTY WQTLYPFPYL ETIVKWSNKR KLNTVLVTAL IRQESRFMPN IKSVVGATGL MQIMPQTGKE AAKKINLVSY DLENINDNVN LGTYYLDFTH KKYKNNSMLA IASYNAGPNA INSWLKRFGF DDADAFVEKI PYPETRGYVE SVFENYWNYL QIYNPEVSQL MEKHYAKYNQ
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