| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1959 |
|---|
| Symbol | |
|---|
| ID | 4244383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 3036360 |
|---|
| End bp | 3037823 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638107078 |
|---|
| Product | peptidoglycan binding domain-containing protein |
|---|
| Protein accession | YP_721685 |
|---|
| Protein GI | 113475624 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.315261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0108797 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCCC TTGCATACAT AGAACTTTTT CTAGTTAATA AAGAAATCAA GGATTTAAAA
TTTATTGAAA AACTTAACTG GAAAAAACTT CTCAATTTAA CTTACATCAA CTTTTTATCA
GCAGTAATTG TTAACTCTAT TCTAATTAAT GATAGTTTGG CTCAGGTGTC AGACATTTCT
ATTCCTAAAA CAAATAGTTA TAGTGATTTT AATATTAGTA GAACTCAAAA TAATAAAACA
GCTCAAGAAC AAGTAGCACC TAACTCTTTT GTGTCTAGTT CCAGACTAGA TAATAATGCT
GTAATTCCTA CTCCCAATAG CCAAGTGTAT TTAAGATGTG GAGACTTTTC AGAGATAGTA
GCAGAAGTTC AAAGAGAACT TAGAGAACTA GGCTATTTTA CTGCTAATCT AACTGGGTAT
TATGGTCAAG AAACAGAAAT AGCTGTCAAA CAGTTCCAGC AAGAAAAGGG TCTTAAACCT
ACTGGTGAAA TTGAACCTAC TACCTGGTTA TTACTATTTC CAGATAGAAA AAATAGCCAA
ACTAATAGTC GGTTCTTCAA TTCTTCCACA AAAGTATTAT CTTTTGGAGA AGTTAATCCT
CAAGTAGCAA TTATTCAAAG ACAATTAGCA GAACTAGGCT TTTACAAAGG TCAAATCAAT
AGTATTTATG ACCAAAAAAC TAGAACTGCG GTGATCCAAT TTCAAAATGT TTATGGAATT
ACACCTACTG GTCAGGTAGG ATACACCACT AGGGAATTTT TGTTTGAGAC CAGAACTATT
CCTGTGGAGA GAGTTTTGAG GCTGGGAAAC ACAGGTCTAG ATGTGAGGAG ATTACAGCAA
CGTTTACGAA GTTTAGGTTA TTATCAGAGG CAGATAACTA ACTATTTTGA TCTAAGTACA
GAAACGGCAG TCATTGATTT TCAAAAAAGA AACAGAATTA CTCCTACAGG TATAGTTGGA
CAAACAACTA AAGCATTTCT TTTTGATGCT GATCAAGTTC TACCTCCAGG TCCAGTATCT
TACTCTAGAG GGAATTATGC TAGGAAACAT TACTCATACC AAGGTTTACT GAAACCGGGC
AATGAAGGTT GGGCTGTTGA ACAACTCCAA ATTTTATTAA CAAGATTGGG TTATTATTCT
GGAGTGATTG ATGGTTTTTT TGGACTTAGA ACAGAATTTG CTGTCAGAAG CTTTCAGCAG
GATTTGGGAC TAGTTGATAC TGGAGTAGCA ACAATAGATA CATTACAGGC CTTAAGACAT
CCTTTGATTA TCAACCAAAA TATTTCTGAG GAGCAATTTA GTGATATTGG TAACCAAACA
CAAGTATTAG AACTTCAAAA TCGACTTCGT TTACAAGGCC TTTATACTGG TCCATTGAAT
GGAGTTTATA ATTCACAAAC TAGATCAGCA GTAGCAGAAG CTCAACTAAT TTATGGAGTT
AGTGGGAAAG ATATTGTAGA CTAA
|
|---|
| Protein sequence | MESLAYIELF LVNKEIKDLK FIEKLNWKKL LNLTYINFLS AVIVNSILIN DSLAQVSDIS
IPKTNSYSDF NISRTQNNKT AQEQVAPNSF VSSSRLDNNA VIPTPNSQVY LRCGDFSEIV
AEVQRELREL GYFTANLTGY YGQETEIAVK QFQQEKGLKP TGEIEPTTWL LLFPDRKNSQ
TNSRFFNSST KVLSFGEVNP QVAIIQRQLA ELGFYKGQIN SIYDQKTRTA VIQFQNVYGI
TPTGQVGYTT REFLFETRTI PVERVLRLGN TGLDVRRLQQ RLRSLGYYQR QITNYFDLST
ETAVIDFQKR NRITPTGIVG QTTKAFLFDA DQVLPPGPVS YSRGNYARKH YSYQGLLKPG
NEGWAVEQLQ ILLTRLGYYS GVIDGFFGLR TEFAVRSFQQ DLGLVDTGVA TIDTLQALRH
PLIINQNISE EQFSDIGNQT QVLELQNRLR LQGLYTGPLN GVYNSQTRSA VAEAQLIYGV
SGKDIVD
|
|---|
| |