Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1823 |
Symbol | |
ID | 4244537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2783783 |
End bp | 2785003 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638106945 |
Product | geranylgeranyl reductase |
Protein accession | YP_721553 |
Protein GI | 113475492 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02023] geranylgeranyl reductase [TIGR02028] geranylgeranyl reductase [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.626977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.601961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTTTAA GGGTTGCTGT TGTAGGTTCA GGTCCAGCGG GTTCCTCTGC TGCCGAGACT TTAGTAAAAG CAGGTATTGA AACTTATTTA TTTGAGCGAA AACTAAATAA CGCTAAGCCT TGTGGTGGAG CTATTCCCCT ATGTATGGTC AGTGAATTTG ATCTCCCACC AGAAATTATC GATCGCCGAG TTAGAAAAAT GAAAATGATA TCTCCCTCCA ATGTTGAGGT AGATATTCAT ATAGAAAAAG AAGATGAATA TATCGGTATG TGCCGTCGGG AAGTATTAGA TGGCTTCCTC AGAGACCGGG CGGCTTCCCT AGGAGCTAAC CTCATTAATG GTACTGTTTA TAAACTTGAT CTTCCTAATA ATGATAGAGA ACCCTACACT ATTCATTATT CTGACCATTC ACAAGGAGAT ATTCAAGGAA CGGCTAAAAC CTTAAAAGTA GATTTAGTTA TTGGAGCAGA TGGGGCAAAC TCCCGTGTGG CTAAAGCTAT TGATGCTGGA GACTATAACT ACGCGATCGC TTTCCAAGAG CGTATCCGCC TCCCTGACCA TCTTATGGCA TACTACGAAG ACCTTGCAGA AATGTATGTG GGGGATGATG TTTCCCCAGA CTTCTACGCT TGGGTATTTC CTAAATATGA CCACGTGGCT GTAGGTACTG GTACAATGAA GGTTCACCAG GCAAAAATTA AACAGCTACA AGCAGGTATT CGAGCTCGTG CAGCTAAACG CCTCGAAGGT GGCCAAATAA TTAAGGTAGA AGCTCATCCT ATTCCTGAAC ATCCTCGTCC CCATAGGGTT CGTGGCAGAG TTGCTTTAGT CGGAGATGCT GCGGGTACTG TTACTAAGTC TTCTGGTGAG GGTATCTATT TTGCAGCTAA GTCTGCTCGG ATGTGTGCTG AAACTATTGT TGAGGCTTCT AACAATGGTG CTATTATTCC TACTGAAGCA GACTTAAAGC TTTATCTGAA ACGGTGGGAT AAGAAATATG GCATGACTTA CAAAGTATTG GATATTTTGC AGAGGGTATT CTATCGTTCT GATGCGACTC GAGAGGCATT TGTGGAAATG TGCGCTGATA GGGATGTGCA GAAATTAACT TTTGATAGTT ATTTGTACAA GACTGTTGTT CCTGCTAACC CTTTAATTCA AATGAAGATA ACTGCTAAAA CTATTGGTAG TATGCTCCGG GGTCATGCTT TAGCTCCGTA A
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Protein sequence | MTLRVAVVGS GPAGSSAAET LVKAGIETYL FERKLNNAKP CGGAIPLCMV SEFDLPPEII DRRVRKMKMI SPSNVEVDIH IEKEDEYIGM CRREVLDGFL RDRAASLGAN LINGTVYKLD LPNNDREPYT IHYSDHSQGD IQGTAKTLKV DLVIGADGAN SRVAKAIDAG DYNYAIAFQE RIRLPDHLMA YYEDLAEMYV GDDVSPDFYA WVFPKYDHVA VGTGTMKVHQ AKIKQLQAGI RARAAKRLEG GQIIKVEAHP IPEHPRPHRV RGRVALVGDA AGTVTKSSGE GIYFAAKSAR MCAETIVEAS NNGAIIPTEA DLKLYLKRWD KKYGMTYKVL DILQRVFYRS DATREAFVEM CADRDVQKLT FDSYLYKTVV PANPLIQMKI TAKTIGSMLR GHALAP
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