Gene Tery_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1791 
Symbol 
ID4243773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2735038 
End bp2735787 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content33% 
IMG OID638106915 
ProductTspO and MBR like proteins 
Protein accessionYP_721523 
Protein GI113475462 
COG category[T] Signal transduction mechanisms 
COG ID[COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAT CAAATGATGG TGGAAAAATT GAACATATTG TCAATACAGT AATGGGGGTA 
AAAACTGAAG ATACAAATCA ATCTCTAGAC AGAAAAATAG TTCCGACAAA AGAACTAGAT
TTGAAGACAG TTTTAATTTA TAAATTAGGA ACTATTCTGC AAATAGGAAT AATTATTCTC
ACTTTCTGGG GAATGGAAAA ATTAGTAATT TTAGTTGATA ATTCCTCCTT TTTTCCCAAT
TGGTTAAGCA CTGTATTTGC CGGATTATTT TTCACATTAT TGAGTATTCG TTCGCGAATT
TTTTCGTTCT TAGATAATAC CCGCACTAGG AAAACCTATG ATAATATTGT TAGACCAAAA
TGGGCACCTC CACCTCTAGC TTTTCCCATA GTTTGGATGA CAATTTCCAT TTTAAGAGTA
ATTTCTTCTC TATTAATTTG GCAGCAGATG AACCAACAAT TTTTAGTGCT TCCTTTTATA
GCTTTTGCAC TACATCTTGC TTTAGGAGAT ACTTGGAATA CTATCTTTAC TGTACAAAAG
AGGTTAGGTG CTGCTGTTCC TGTAGTTATT TTAGGTCCTT GGTTATCTGC ATTAATAGTT
ACTATACTTT ACTGGCAAAT TAACCCTATA GCTGGAATCA TTTTGGCTCC TTCTTGTGTG
TGGTTAACTG TGGCTGTTGT ATTAGTATTT AGGATTTGGC AGTTGAATGG TCAAGAACCA
TTATACCCAC TAAAATTAAA CGTTAGCTAA
 
Protein sequence
MNQSNDGGKI EHIVNTVMGV KTEDTNQSLD RKIVPTKELD LKTVLIYKLG TILQIGIIIL 
TFWGMEKLVI LVDNSSFFPN WLSTVFAGLF FTLLSIRSRI FSFLDNTRTR KTYDNIVRPK
WAPPPLAFPI VWMTISILRV ISSLLIWQQM NQQFLVLPFI AFALHLALGD TWNTIFTVQK
RLGAAVPVVI LGPWLSALIV TILYWQINPI AGIILAPSCV WLTVAVVLVF RIWQLNGQEP
LYPLKLNVS