Gene Tery_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1428 
Symbol 
ID4243021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2160500 
End bp2162746 
Gene Length2247 bp 
Protein Length748 aa 
Translation table11 
GC content33% 
IMG OID638106586 
ProductMiro-like 
Protein accessionYP_721197 
Protein GI113475136 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAAAA CTATTGAGGC GGTTGTTAGA AAGCTATGGC TATCTCCGGA GAATGCCGTG 
GAAGAGGTGG TAAGATTTGA GCGTCGTTTT GGAGAAGAAA ATTTTAAGCT TGCTTGTCAT
TGTGGGTTGT TTTTGATTTT AACTCCTGAA TTAGTTAATT TAATTCGGAT TAATTTTTTG
GATGAGGAAA ATATTCCTTG GATAGGAGAA AGTAATTTTT TGTTGTCTTC TTTATGTCGT
CCTTTACAAG AGGGAGTTTA TGAGGTTGAG CCTTGTGTGA GGGAAGTTTT GTTGGAGGAA
TTGGAGGATA AATTTGGTTG GCGACGACCT TTTGAATTGG CTGAATTTTT GTGGTTTTAT
TTGGATAAAC AAGGGGAGAG AAAACCATCT GGAGAGTTAA GAATGGTTCA AGAATGGATT
GCTCAAGCTT ATTTAGATCC CGATAGGACA ATTCGGGAAA TGGAGAGCTT TTTATCTGAA
AGTTTGCCGG AAGATAATCC GGTTTTGGGG TTAGCTGGTC AAGAAAAAAT TCCTTATTTA
GTGGAGATTT TGGCTCAACC TTTGGAGCAG ACTAATTTAT GGAAAGAGTA TCAAAATTTG
GTGCTTAATT CTCATGTTTT GGCAAAGTTA TTGGTTGATG AAAAGGAGGG GTTAGGGGAG
GAAATTGAGG AGTTAAAAGA AGAGTTTGGA GATGGGGAGG AGGTCAAATT AGGTAATGAG
AAGTTTTTCT TAATTCATCC TGTTATTAAA AAGTTTTTGG CAGAGTTTCC TCCAGAAAAA
GGAATAGATT ATATCTGTGA AGCTAAATTA CTAATTGTTG GAGAAGCTGG AGCTGGTAAA
ACAGCTTTAG CTAATAAAAT TATCAACCCA AACTATCAAC TCAAAGATGA AGATACAACC
AAAGGAATTG AAGTTTATCA GTACAACTTT AAGACAAAAA ACCAAAATGA CTTTCAAATA
AATATTTGGG ATTTTGGCGG ACAAGAAATT TATCACACTA CCCACCAATT TTTCTTAACA
AAACGCTCTC TATATATCCT TGTCGTTGAT ACTCGCAAAG AAGATACAGA CTTTTATTAT
TGGCTCAATG TAGTAGAATT ATTAAGCGAT AATAGCCCCT TATTAATTGT GAAAAATGAG
AAACATGAAC GGCAACGAGA AATTAATCAA CGGGGATTGC AAGGGCAATT TACTAACATT
AAAGAAATCT TAGCTACCAA CCTTGAAACT AATCGCGGTT TAGAAGAAAT TATCAGAGAA
ATCGAACATC ATATTAGTGA ATTACCCCAT ATTGGCAGTA GTTTACCTAA AACTTGGAAA
CAAGTCCGGG AAATCTTAGA ATTAGACTCC CGTAACTATA TTAGTCTAGA AGAATATTTA
TCTATTTGTA AACAAAATGG CTTGACAAAA TTGGAGTATA AATTACAGTT AAGTCGCTAT
TTACATGACT TAGGAATTTG TCTTCATTTT CAGGATAACC CACTGTTAAA TAAAACAGTT
ATTCTCAAAC CAGAATGGGG AATAGCGGCA GTTTATAAAA TCTTAGATAA TCCGACAGTT
TATAATAACT TCGGCAAATT CACCAAAGAT GATTTAACCA ATATCTGGAA TGAAGAAAAA
TATGTGGATA TGCGCGATGA ACTACTCCAG TTAATGATTA GATTTAAACT ATGTTATAAA
ATTCTTGGTA ATTCTCAGAC CTATATTGCC CCTCAACTTT TAACAGAAAA TCAACCAGAA
TATGACTGGG ATGAAAATAA CAATTTGATT TTACGTTACA CCTACAAATT TATGCCCAGA
GGAATTATCA CTCAGTTTAT TGTAGATATG CACCGAGATA TTGAACAACA GAAATATGTT
TGGAAAAGGG GAGTTATTAT CAAGCAAAAT GAAACCAGAG CAGAGGTAAT TGAATATTAC
GACAGAAGAG AAATAAAAAT TAGGGTTTCT GGACGACAAA AACGGGCTTT AATGACTCTC
GTAACTTACC TATTAGATAA AATTCACAGT TCCTATAATA ATCGACTCAA ATATAATCAC
TTATTTCCTT GTACTTGTGC TGCTTGTAAA AATAGCCAGA ATCCACATTT TTATAAACTT
GAAAAATTAA AAGAATGGAT TCGTAATGGT AGACTAAAAA CTACCTGTGA GAATCATCCT
TATAATGAAG TTAATATAAA GAGTTTAATT GATAATGTAA TAAATATAGA TTTATTATCA
AAACTTAGAT ATATGGTACG CGATTAA
 
Protein sequence
MVKTIEAVVR KLWLSPENAV EEVVRFERRF GEENFKLACH CGLFLILTPE LVNLIRINFL 
DEENIPWIGE SNFLLSSLCR PLQEGVYEVE PCVREVLLEE LEDKFGWRRP FELAEFLWFY
LDKQGERKPS GELRMVQEWI AQAYLDPDRT IREMESFLSE SLPEDNPVLG LAGQEKIPYL
VEILAQPLEQ TNLWKEYQNL VLNSHVLAKL LVDEKEGLGE EIEELKEEFG DGEEVKLGNE
KFFLIHPVIK KFLAEFPPEK GIDYICEAKL LIVGEAGAGK TALANKIINP NYQLKDEDTT
KGIEVYQYNF KTKNQNDFQI NIWDFGGQEI YHTTHQFFLT KRSLYILVVD TRKEDTDFYY
WLNVVELLSD NSPLLIVKNE KHERQREINQ RGLQGQFTNI KEILATNLET NRGLEEIIRE
IEHHISELPH IGSSLPKTWK QVREILELDS RNYISLEEYL SICKQNGLTK LEYKLQLSRY
LHDLGICLHF QDNPLLNKTV ILKPEWGIAA VYKILDNPTV YNNFGKFTKD DLTNIWNEEK
YVDMRDELLQ LMIRFKLCYK ILGNSQTYIA PQLLTENQPE YDWDENNNLI LRYTYKFMPR
GIITQFIVDM HRDIEQQKYV WKRGVIIKQN ETRAEVIEYY DRREIKIRVS GRQKRALMTL
VTYLLDKIHS SYNNRLKYNH LFPCTCAACK NSQNPHFYKL EKLKEWIRNG RLKTTCENHP
YNEVNIKSLI DNVINIDLLS KLRYMVRD