Gene Tery_1363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1363 
Symbol 
ID4241860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2091665 
End bp2092519 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content33% 
IMG OID638106537 
ProductABC-2 type transporter 
Protein accessionYP_721148 
Protein GI113475087 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.521768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA GTATTATCCG CAAAACCAGC AGAGTTAGTA ATTGGCTAAC CGTGGTAAAT 
ACTGATTGGT TAGTTAATTT AAACTTATTA TTCACATTAG TACGAAGGGA TTTAGAGGCC
AGGTATAAAG GCTCAATTCT TGGAAATTTA TGGCCACTAC TCAATCAGCT ATCCCAACTT
TTAATTTATA CCTACGTCTT CTCAATTATT CTTAAAGTTA AACTGAGCCT CAGAGGATTA
CCAGAAGATA GTAAGCTAAC CTTTGGACTA TGGCTATTTG CAGGATTAAT AGCTTGGCTA
GCTTTCACTA ATGGATTAAC TCAAGCTTCT GGATGTGTAA TTAGACAGCC CAATTTAGTT
AAAAAATTAG TCTTTCCACT CAGTTTATTA CCCTTAGTTC CTATTCTTTC AACATTTCTA
GAAAGTACAT TTGGGTTAAT AGCTTTAATA GGAATGCTTT ATATATCATC TGGGGTAATA
AATCAAACAT TATGGCTACT ACCTATAGTA TTTATACCTC AACTTTTATT AACAGCAGGT
TTAGGATATT TTACTGCCGG ATTAACAGTA TTTTTACGGG ATATTCCACA GACTTTAGGA
GTAATTATTA ATCTTTGGTT TTATGTTACA CCAATAGTAT ATCCTGCATC AGTAATTCCA
GAAAATTGGA GAGTTTGGGT ATTTTGGTGT AATCCTTTAA CAGCGATAGT CGAAGTATAT
CGTGACCTAA TATTAGTAGG AGAAATTCAA CACTGGGGAG AATTAGGAAT TGCTACTTTA
ATGTCTACAC TAATATTTTA TTTTGGCTTG TGGGTTTATC AAAAATTACG TCCTGCTTTT
GCCGATGTTT TATGA
 
Protein sequence
MMKSIIRKTS RVSNWLTVVN TDWLVNLNLL FTLVRRDLEA RYKGSILGNL WPLLNQLSQL 
LIYTYVFSII LKVKLSLRGL PEDSKLTFGL WLFAGLIAWL AFTNGLTQAS GCVIRQPNLV
KKLVFPLSLL PLVPILSTFL ESTFGLIALI GMLYISSGVI NQTLWLLPIV FIPQLLLTAG
LGYFTAGLTV FLRDIPQTLG VIINLWFYVT PIVYPASVIP ENWRVWVFWC NPLTAIVEVY
RDLILVGEIQ HWGELGIATL MSTLIFYFGL WVYQKLRPAF ADVL