Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1324 |
Symbol | |
ID | 4242475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 2019402 |
End bp | 2021213 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638106507 |
Product | Na+/solute symporter |
Protein accession | YP_721118 |
Protein GI | 113475057 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.54237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTAA TTGATTGGCT AATTGTTTTA CTATACCTTA TTTTAACTAT GTGGATGGGG CTATATCTAT CTCGCAAAGG TGCAAAAAGT TTAGCAGACT TTTTTGTTTC TGGGCGATCG CTTCCTTGGT GGTTAGCAGG TACAAGTATG GCAGCTACAA CTTTTTCCAT AGATACTCCT CTTTATATTA CAGGGGTTGT AGCTAACCGA GGAATAGCTG GTAATTGGGA ATGGTGGATT TTTGCTGTTT CTCATGTAAT TATGATTTAT ATTTTTGCTA AAATGTGGCG ACGCTCGGAA GTAATTACTG ATGCTGAATT AACTGAAATT CGTTACGGCG GAAATATGGC AGCTGTTCTA CGAGGAGTAA AAGCTTTTAT CTTTGCTATT CCTATGAATT GTATTGCTAT TGGTTATGCT ATGTTAGCTA TGGTTAAAGT TGTTGAAGCA TTGCAAATTT GGCAAAGTTT AGGTATTGAT GCTAATGCCA ATAATCTCAA ATTATTAAGT GTGATAGGTG TAAGTATATT TGTATTAATT TATGCTGGTT TATCTGGTTT ATGGGGAGTA GTTGCTACAG ATTTTTTCCA ATTTTTTCTA GCACTATTTG GGGCAATTAT TGTAGCGTTT TTTGCTGTTA ATAGTGTGGG TGGAATACAA GAATTAATTA TTAAAATTCC TCAAGTTATC CCAGACAAAG ATATTTTATC ATTTGCACCT TTTACTATTG GTGGAAATGG TAACTCTTGG ATTACTTTTA GCAAAACAGC AGGCATAACT GCGAGTACAT TTTTTGCTTA TATTGCTATT CAATGGTGGT CTTGGCGCCG CAGTGATGGA GGAGGAGAAT TTGTACAAAG ATTTGCTGCT GCAAAAAATG AAACAGAAGC AGAAAAAGCA GCCTGGTTAT TTAATATAAT GCACTATGTT ATTAGAACCT GGCCTTGGAT TTTAGTTGCT TTAGCTTCTA TTATAATTTA CCCCGATTTA CAAGATAGAG AATTGGGTTA TCCTAAATTA ATGATTGATT TTCTTTCTCC AGGAATTTTA GGCTTAGTTG TTGCTTCTTT AGTGGCAGCA TTTATGAGTA CAGTTTCTAC TTCTATTAAT TGGGGCGCTT CTTTTATTAC TAATGATTTA TATCGAAGAT TTATTAAACC TGATGCTACT CAGGCAGAAT TAGTTTTGGT AGGACGACTT TCTTCTCTAT TAGTAACAGT TTTAGGAGGA GTTGCTGCAT TTTTTGCTAA AGATGTGGCA ACAGTATTTA GGTTAGTAAT AGCTATTGGA ACAGGTTCGG GGTTGGTATT AGTTTTACGT TGGTTTTGGT GGCGAGTAAA TGCAGCAGCA GAATTAACTG CTATTGTCGC TAGCTTTTTT GTGGGGATGG CAACTAGTTT ATTTCCTGCC TTCAAAATAG AAGATTTTGG TTTGCGAATT ATCTTTATTA CTGTAACTGT AACAGTTTTG TGGGTGGTAG CAATGTTGAT TACACCGCAA GAGTCTGATG CTACTTTAGA AGACTTTTAT CGGCGATCGC TCCCCGGTGG TCCTGGTTGG CAACGGCAAA GAGTAAGCAC TGGTTTAGCT CCTGCACAAA ATTTGGGTAA GGATTTACAA AAGGTTCTGG CATCTATATT ATTATTGTTT GGAGCGTTGT TGGCGACTGG TGGTTTCCTG TTACTTAAGC CAACTATTGG TTGGATATTT ATGATTATTG CTGTTTTCAG CGGGATGTGG TTGCGACAAC TCAATAAGTC TAAAATTTTA CCTATGCCAA GACCAGGGTT AGATGATGAA GATTTGTTAT AA
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Protein sequence | MKLIDWLIVL LYLILTMWMG LYLSRKGAKS LADFFVSGRS LPWWLAGTSM AATTFSIDTP LYITGVVANR GIAGNWEWWI FAVSHVIMIY IFAKMWRRSE VITDAELTEI RYGGNMAAVL RGVKAFIFAI PMNCIAIGYA MLAMVKVVEA LQIWQSLGID ANANNLKLLS VIGVSIFVLI YAGLSGLWGV VATDFFQFFL ALFGAIIVAF FAVNSVGGIQ ELIIKIPQVI PDKDILSFAP FTIGGNGNSW ITFSKTAGIT ASTFFAYIAI QWWSWRRSDG GGEFVQRFAA AKNETEAEKA AWLFNIMHYV IRTWPWILVA LASIIIYPDL QDRELGYPKL MIDFLSPGIL GLVVASLVAA FMSTVSTSIN WGASFITNDL YRRFIKPDAT QAELVLVGRL SSLLVTVLGG VAAFFAKDVA TVFRLVIAIG TGSGLVLVLR WFWWRVNAAA ELTAIVASFF VGMATSLFPA FKIEDFGLRI IFITVTVTVL WVVAMLITPQ ESDATLEDFY RRSLPGGPGW QRQRVSTGLA PAQNLGKDLQ KVLASILLLF GALLATGGFL LLKPTIGWIF MIIAVFSGMW LRQLNKSKIL PMPRPGLDDE DLL
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