Gene Tery_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0577 
Symbol 
ID4244603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp927461 
End bp929014 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content34% 
IMG OID638105882 
ProductATP phosphoribosyltransferase regulatory subunit 
Protein accessionYP_720495 
Protein GI113474434 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0124] Histidyl-tRNA synthetase 
TIGRFAM ID[TIGR00442] histidyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACTA TCAAAGTAGA AAGAGTCACA GGAGTTAACG ACATTCTCCC AAGTACCTAC 
CAGATAGATC AACAAATCAA AAGTATACTG AGTAGCAATT TTGAGTCCTA TGGATATCGA
CCCATAGATG TACCACTCAT AGAATATACC GAACTCTATC TAAAAAAATC TGGTGAGGAT
ATTATTTCTC GTCTCTACGA CTTCATTTAC CGCAACCGTC GCCTCTGTCT AAGACCAGAA
TTTACAGCTT CAGTGGTCCG TGCTTATTTA GACAATTTAC AAGAACTACC CCTGCCAGTG
CGACTTTATT ATATGGGGCC AGTATTTCGT TATGAACAGC CCCAGAAAGA AAAATATGGA
CAGTTTACTC AAATGGGAAT AGAGTTAATA GGTGCCACAG GAGCGATCGC TGATGGGGAA
ATTATTTCTA TGGCCTGTCA AGGTTTAGAT CGTCTAGGTT TAACTGAATA TCAAACATTT
ATCGGCCACG TTGGAGTCCT CAATAATTTT CTTGACCATC TTCAGCTAGA CACTCGTCTT
CGTAGTTTTC TACTTACTCA GATGGAAACT CTAAGAATAG AAGGTAAAGA GATAGTAGAA
AGTCGACTTT CTGAAATCTA TCCTGCTTTT AAAAAAAATA ATTTTTTGGC AGAACAACTA
GATACAAATA CGACAACAAA AAAAATCACA GATATCCTAC AAAATTTAGA AGAAAATGAG
GCAAGAACAG CAATTTTTAA GTTGCTGGAA AGTATGAATA TAGAACTTAC AAGTACTCGT
ACACCAGAAG AAATAGTTGA CCGTTTGTTA ATTAAAATTA AACATCAAGA TCAAACTAAA
GAGCTAAATC AAGCATTAGA GTTTATGACA GAATTGAGTC AACTCAAAGG AGAGCCTCAA
GCCATATTCA AAGAAATAAA AAAACTACTT TCGGCTTATG GTATTGATGA TTATGGTTTA
GCAGAATTAC AAGATATTTT GAAAAGTTTA GAAGCTTTTA ATATTGACAA AAATCGTATT
AGTCTTGACC TGGGAATTAG TCGGGGTCTT CAATATTATA CAGGTATGGT TTTTGAGATT
TATGACAGCA AGTTAGGAGT AGAAAGAAAA TTATGTGGTG GAGGTAGATA TGATGATTTG
GTTGTCAGTT TAGGAGGTAA ACAGGAAACT CCTGCCACTG GTTTTTCCTA TCTCATGGAA
GAACTCAGAA AAGAATTAAC AGAAAAAGCT CATTTGAGTT TCAATAATTA TCAATTTGTT
GAAGCTCTAG TAGTTGGTTT GACTAGAGAA GATTATAGTG ATTCTGTGAG AGTTGCTGAA
AAATTAAGAA GCCTAGGCTT GCGAATAGAA ACTGATGTTA TTGGAAGAGA TATTCAGAGT
AATATTGAGT ATGGAAATCA GCAGAAAATT TCATTTTTAA TTATTGTAAA CTCTACCGAA
AAAAAAGGTG GTAAGGTGCT TTTGCAAAAT CTAGATTCAG GAGAACAAAA AAAATTAGAG
TTGCATGAAG TAGTACATCA AGTTAGAAAT ATTAAAGATA ATACCAATTG TTAA
 
Protein sequence
MQTIKVERVT GVNDILPSTY QIDQQIKSIL SSNFESYGYR PIDVPLIEYT ELYLKKSGED 
IISRLYDFIY RNRRLCLRPE FTASVVRAYL DNLQELPLPV RLYYMGPVFR YEQPQKEKYG
QFTQMGIELI GATGAIADGE IISMACQGLD RLGLTEYQTF IGHVGVLNNF LDHLQLDTRL
RSFLLTQMET LRIEGKEIVE SRLSEIYPAF KKNNFLAEQL DTNTTTKKIT DILQNLEENE
ARTAIFKLLE SMNIELTSTR TPEEIVDRLL IKIKHQDQTK ELNQALEFMT ELSQLKGEPQ
AIFKEIKKLL SAYGIDDYGL AELQDILKSL EAFNIDKNRI SLDLGISRGL QYYTGMVFEI
YDSKLGVERK LCGGGRYDDL VVSLGGKQET PATGFSYLME ELRKELTEKA HLSFNNYQFV
EALVVGLTRE DYSDSVRVAE KLRSLGLRIE TDVIGRDIQS NIEYGNQQKI SFLIIVNSTE
KKGGKVLLQN LDSGEQKKLE LHEVVHQVRN IKDNTNC