| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0136 |
|---|
| Symbol | |
|---|
| ID | 4242421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 197814 |
|---|
| End bp | 198488 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638105485 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_720104 |
|---|
| Protein GI | 113474043 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4938] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.224631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0478866 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATATT TCCAATTTCA ACAACTAGAA AATTTAGCCA CTAAAGGAGA ATACACAGCC
CATTTTTTAT CTGTAAATGA AAGTAAAACT ATACCAAATC GTAGCTTAGG ACATTCACAA
GCAAAATCCC TAGTTTTAAG AGATCAAGTT GAAGCTTGGA TGGGAGAAAT TAGCCCTGGT
ACACACTTAC AAATAAATGT TAAACAAGAT ATAGATTTAA TCAGTCTTCA ATATTATTAT
GGAGATAGTA ACCCTTATCG TTCTACTAAT GTTGGATTTG GAATTAGTTA CACTTTACCA
ATTATTGTAG CTATTCTTTC ATCCCCACCA GAAACTTTAA TTATAATAGA AAATCCTGAG
GCACATCTTC ATCCGAAAGG TCAAGCAAAA ATGGGAGAAT TATTAGCTCT TGCTGCTAGT
TGTGGAATGC AAATTGTAGT TGAAACTCAC AGCGACCATG TTTTAAATGG AATTAGATTA
ATAGTTTATA GAGAAAAAGT TGACCCTAAA AAAGTTCAAT TACACTATTT TGACAGCCAA
AAACGAGGAA GAGAATTTAT CACTGAAGTT ATATCCCCAC AGATAGATCG AAACGGACGG
ATCGATAAAT GGCCAGAAGG TTTTTTTGAT GAGTGGGATA ATAGTTTAGA AGCTCTTTTG
GAACCCAGGG AATAA
|
|---|
| Protein sequence | MSYFQFQQLE NLATKGEYTA HFLSVNESKT IPNRSLGHSQ AKSLVLRDQV EAWMGEISPG
THLQINVKQD IDLISLQYYY GDSNPYRSTN VGFGISYTLP IIVAILSSPP ETLIIIENPE
AHLHPKGQAK MGELLALAAS CGMQIVVETH SDHVLNGIRL IVYREKVDPK KVQLHYFDSQ
KRGREFITEV ISPQIDRNGR IDKWPEGFFD EWDNSLEALL EPRE
|
|---|
| |