Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0023 |
Symbol | |
ID | 4241830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 39907 |
End bp | 40488 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638105401 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_720020 |
Protein GI | 113473959 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTACAG GAAATTTAAT CATACAAGGA AATAAACTGA AACGTGAGGG AAAGTTAGAT GAAGCGATCG CTCTCTATAC ACAAGCTATA AATTTAAAGC CAGACTTTGC TTTTACTTAT TATGAATTAG GGGATGCTCT GGAAAAACAA GGTAATTTTG CTCAAGCCAT TATTGAATAT GAAAAAGCTA TTGAACTGAA TCCTAATATA GATTTTTTTC ATCAGAGTCT GGAAACAATT AAAAGTAGGA AACTTGAGCA AAATATTGAT TTGACTTCCA ATCAAATTAA CTCAGATTTT TTGGTTGTGG GAATTTCCAT GATTAAAAAC GAGGAAGACG TTTTAGAAAC TTTTATTCGT CATAATTTGA ACTATCTTGA CTTTTTAGTA TTAGCCGATA ATGGTTCTAC AGATAATAGT AGAAAAATCA TTAACAAACT TATTCAAGAA GGTTTCAACC TTTGTGTAAT TGATGACTAT AAAATGGCTC ATAATCAAAA TAATAAAATG ACAAATTTCT ACAGAAGAGT AGCTACATCA TTATTTCCAG AATTTATTGT TCCAATGATG CAGATGAATT AA
|
Protein sequence | MTTGNLIIQG NKLKREGKLD EAIALYTQAI NLKPDFAFTY YELGDALEKQ GNFAQAIIEY EKAIELNPNI DFFHQSLETI KSRKLEQNID LTSNQINSDF LVVGISMIKN EEDVLETFIR HNLNYLDFLV LADNGSTDNS RKIINKLIQE GFNLCVIDDY KMAHNQNNKM TNFYRRVATS LFPEFIVPMM QMN
|
| |