| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcur_3072 |
|---|
| Symbol | |
|---|
| ID | 8604416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermomonospora curvata DSM 43183 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013510 |
|---|
| Strand | + |
|---|
| Start bp | 3560539 |
|---|
| End bp | 3561315 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | CHAP domain containing protein |
|---|
| Protein accession | YP_003300652 |
|---|
| Protein GI | 269127282 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000377273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGTGG CAGGCAAGCA CCACATCACC CGCCTCACCC GCACCCTCCA GTCCCGCAAG
AGCACCGTCG CCAGCGCCCT GGTCGCCGGT GCGGTGGCCA CCACCGCGCT GGGCGTGGCC
GCCCAGGCGC CGGCGCAGGC CGCCGTGGGC GCCGCCGCCC CGATCACCAC CCTCGCCGAG
AGCGGCAAGG CGGCCAAGTC GCTGGCCGGC GGGACCGGCA CGGTGAGCAG CGCGCACGCC
GCGGTGTACA AGGCCCCCGC CAAAAAGCAC GGCGGCAAGA AGGCCGTGAC CGCCGGCGAG
GTGATCGAGG TGGCCGAGTC CCAGCTGGGC CTCACCGAGG ACGCCAAGGG CGAGAGCAAG
TTCGGCAAGT GGTACGCCTC CACCCCGCAC GCCAAGCGGA CCCTCCAGCG CGACGGCGGC
GGCAGCGACC CCAAGGTCTA CAAGTCCGCC CCCTGGTGCG CGATGTTCGT GACCTGGGTC
GGTGAGCAGG TCGGCACCGA TGAGCTGGGC GCGGACGCCT ACACCGTCAC CCACGCCAAG
TCCTTCAAGG ACAAGGGCCG CTGGGGCACC AAGCCCAAGC CCGGCGCGGT GGTGTTCTTC
GACTGGGCCG GCGGCAAGAG CATCGGCGGC ATCGACCACG TGGGCCTGGT CGCCGAGGTG
CTCGACAACG GCAAGATCAA GACCGTGGAG GGCAACATCT CCAACGCCGT CGTCTCCAAG
GTCCGCACCC CCGACACCAT CGTCGGCTAC GGGTACCCCG ACTACGCCGC CGAGTGA
|
|---|
| Protein sequence | MLVAGKHHIT RLTRTLQSRK STVASALVAG AVATTALGVA AQAPAQAAVG AAAPITTLAE
SGKAAKSLAG GTGTVSSAHA AVYKAPAKKH GGKKAVTAGE VIEVAESQLG LTEDAKGESK
FGKWYASTPH AKRTLQRDGG GSDPKVYKSA PWCAMFVTWV GEQVGTDELG ADAYTVTHAK
SFKDKGRWGT KPKPGAVVFF DWAGGKSIGG IDHVGLVAEV LDNGKIKTVE GNISNAVVSK
VRTPDTIVGY GYPDYAAE
|
|---|
| |