Gene Tcr_2165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2165 
Symbol 
ID3761330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2387282 
End bp2388661 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content43% 
IMG OID637786914 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_392427 
Protein GI78486502 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGAA AAATAGTACA AATCATCGGC CCGGTTATCG ACGTCGAGTT TAAAGGTGCT 
GATTTACCAA AAATCTATGA CGCGTTAAAA GTTGATGAAC TGGATCTTAC TTTAGAAGTT
CAACAACAAG TCGGTGATAA CGTTGTACGT GCAATCGCAA TGGGTTCATC TGACGGTTTA
AAACGTGGCA TGGCAGTTTC TAACACGGGC GAAGCGATTT CGGTTCCGGT TGGTAAACCA
ACACTTGGTC GTATCTTTGA TGTTCTAGGG AATCCGATTG ATAACGCGGG TCCTGTTGAA
TCAGAAGAAA AAATGACAAT TCACCGTCCT GCTCCAGCGT TTGATGAGCT AGCAGCTTCT
CAAGAGTTAC TGGAAACAGG TGTTAAAGTT ATCGATTTGA TCTGCCCATT TGCTAAGGGT
GGTAAAGTTG GTCTATTCGG TGGTGCCGGT GTTGGTAAAA CCGTAAACAT GATGGAACTG
ATCCGTAACA TCGCGATCGA GCACTCTGGT TACTCTGTAT TCGCAGGTGT TGGTGAGCGT
ACTCGTGAAG GGAACGATTT CTATTATGAA ATGGAAGAGT CTGGAGTACT TGATAAAGTT
GCTCTAGTAT ATGGTCAGAT GAATGAGCCA CCAGGTAACC GTTTACGTGT TGCTTTGACA
GGTTTAACAA TGGCTGAATA CTTCCGTGAT GAAGGCCGTG ATATCTTATT CTTCGTAGAT
AACATCTACC GTTATACACT TGCCGGTACA GAAGTATCAG CATTGTTAGG TCGTATGCCG
TCTGCAGTAG GTTATCAGCC AACACTGTCT CAAGAAATGG GTCAAATCCA AGAGCGTATC
ACGTCAACTA AAACAGGTTC GATTACGTCG ATTCAGGCTG TATACGTTCC TGCGGATGAC
TTGACAGATC CAGCTCCAGC AACAACATTT GCTCACTTGG ATGCGACTGT TGTATTGAAC
CGTTCGATCG CTGAAACAGG GATTTATCCT GCCATCGATC CACTGGATTC AACTTCACGT
CAATTAGATC CTTTAGTGGT TGGTTCTGAA CACTATGACA CAGCTCGTGG TGTTCAAGAA
ACATTACAGC GTTATAAAGA GTTGAAAGAT ATCATCGCTA TCCTAGGGAT GGATGAGTTA
TCTGAAGAAG ACCGTTCATT GGTTGCTCGT GCACGTAAAA TGCAGCGTTT CTTCTCTCAA
CCATATTTCG TAGCAAAAGT TTTCACAGGT GAAGACGGAC GTTATGTCCC ATTAAAAGAA
ACTCTTCGTG GTTTCAAAAT GATTATTTCA GGTGAACTTG ATGATATTCC AGAGCAAGCA
TTTATGTATG CCGGTGATAT CGATGAAGTG CTTGAAAAAG CTAAGAAATA TAAGGATTAA
 
Protein sequence
MNGKIVQIIG PVIDVEFKGA DLPKIYDALK VDELDLTLEV QQQVGDNVVR AIAMGSSDGL 
KRGMAVSNTG EAISVPVGKP TLGRIFDVLG NPIDNAGPVE SEEKMTIHRP APAFDELAAS
QELLETGVKV IDLICPFAKG GKVGLFGGAG VGKTVNMMEL IRNIAIEHSG YSVFAGVGER
TREGNDFYYE MEESGVLDKV ALVYGQMNEP PGNRLRVALT GLTMAEYFRD EGRDILFFVD
NIYRYTLAGT EVSALLGRMP SAVGYQPTLS QEMGQIQERI TSTKTGSITS IQAVYVPADD
LTDPAPATTF AHLDATVVLN RSIAETGIYP AIDPLDSTSR QLDPLVVGSE HYDTARGVQE
TLQRYKELKD IIAILGMDEL SEEDRSLVAR ARKMQRFFSQ PYFVAKVFTG EDGRYVPLKE
TLRGFKMIIS GELDDIPEQA FMYAGDIDEV LEKAKKYKD