Gene Tcr_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1903 
Symbol 
ID3761097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2083488 
End bp2084678 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content46% 
IMG OID637786646 
Productaminotransferase, class I and II 
Protein accessionYP_392167 
Protein GI78486242 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGACT TTATACCCAG CATTGCAGAT CATGCCAAAA CCATTCAACC GTTTCGGGTG 
ATGAAAATTT TAGGGGAAGC CAAAGCGCTT GAGCGCCAAG GAAAAGACAT TATCCATATG
GAAATTGGCG AACCCGATTT TGAATCACTT GAATGTGTGC ATGACGCCGT TAAAACCGCT
TTAGACCAAG GTAAAACACA CTACACTCCC ACGTTAGGGT TGCCTGAACT GCGTCACAAA
CTCAGCGAAT TTTATGCTGA CTTTTATCGA GCCAACGTAA AAAGTGACAA CATTATGCTG
ACGCCTGGTG CTTCGTCAGC ACTGCAGCTG GCATTAACCG CTTTACTCAA TCCGGGTGAT
AAAGTGCTCA TGTCGGATCC AACGTATCCA TGCAACCGTC AATTTGTTCA GCTGTTACAT
GGCGAGTTAG TGCTTTTACC AGTGGATGCG GACAGTGACT ATCAACTGAC ACTGGCGCAT
CTGAAACGAC ACTGGCAAGA CGGAATTAAA GTGGTCATGG TTGCAAGCCC TTCAAACCCT
AGCGGGACTG TAATCGAACA AGATGAATTG ATCAAAATGG CCGAGTTTGC CGCAACAAAA
AATGCGTACT TTTTAGTGGA TGAAATTTAC CAAGGGCTGG TTTACGACCG TCCGGCGGAA
TCGATCTTGA GTCATGATCA CCCGCCAGAC AATGTGATTG TGATCAACTC ATTTTCTAAG
TTCTTCAATA TGACTGGGTG GCGCTTAGGC TGGATGGTGG CGCCTTCTCA TTTAATGTCG
GTCTTGGAAC GGCTGGGACA AAACCTATTT CTCTCCGCGC CCACGCCATC ACAATATGGT
GCTTTACGTG TTTTGGAGAA AGAGGCTTTA ATGCAGTTGG AAGGCCGTCG AAAAATCTTT
GAACGTCGCC GTAATACGTT GTTTCACGCC ATGCAGGACG CAGGCATTCC CCCTAAAGTT
TTACCGCAAG GTGCTTTTTA TCTCTATTGG GATGTATCCG ATTATACGGA TGATGCGGAA
CAATTTTGCT CAAGATTGCT GGCTGAAACC GGGGTCGCTA TAACACCGGG AACAGACTTT
GGTACTCATA AAGCACATCA ACATGTTCGA TTGGCTTACA CGACCTCAGA GGACCAATTG
AAACAAGCCG TTTTAAAAAT TCGAGCGTTT ATCGATACCT TGAGTTTATG A
 
Protein sequence
MTDFIPSIAD HAKTIQPFRV MKILGEAKAL ERQGKDIIHM EIGEPDFESL ECVHDAVKTA 
LDQGKTHYTP TLGLPELRHK LSEFYADFYR ANVKSDNIML TPGASSALQL ALTALLNPGD
KVLMSDPTYP CNRQFVQLLH GELVLLPVDA DSDYQLTLAH LKRHWQDGIK VVMVASPSNP
SGTVIEQDEL IKMAEFAATK NAYFLVDEIY QGLVYDRPAE SILSHDHPPD NVIVINSFSK
FFNMTGWRLG WMVAPSHLMS VLERLGQNLF LSAPTPSQYG ALRVLEKEAL MQLEGRRKIF
ERRRNTLFHA MQDAGIPPKV LPQGAFYLYW DVSDYTDDAE QFCSRLLAET GVAITPGTDF
GTHKAHQHVR LAYTTSEDQL KQAVLKIRAF IDTLSL