Gene Tcr_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1855 
Symbol 
ID3761068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp2030339 
End bp2030968 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content38% 
IMG OID637786599 
Productcation efflux protein 
Protein accessionYP_392121 
Protein GI78486196 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGATT GTGGATGTGA AATTGAGATA AAGGACCAGT CTCAAAAAAA AGTTTTGTAC 
TGGTTGCTTT TAATAAATTT TTCAATGTTT ATTTTGGAGG TAACCGTTGG CTGGGTTGCG 
GAGTCAACAG CGTTAATAGC AGATTCATTA GACATGTTAG CCGATGCTAT GGTGTATATA 
ATTGGGTTGT ATGCGGTTGG TAAAGCAATG CAAAAAAAGG CTCATGCAGC GATAATTAGC 
GGTTATTTTC AAGCTATGCT TGGTGGTTTA ATATTGATCG ATATCGTTCG TCGAATTGTT 
GTAGGAAGTG AGCCAGTTTC AGAACTCATG TTATTAATAG GAGCTATTGC TTTAGTAGCG 
AATATTGTTT GTTTATTACT CATTCAAAAG CATAAAGATG GTGAGGTTCA TATGCGAGCG 
AGCTGGATAT TTTCAGCGAA TGATGTCATT GCAAATGTCG GTGTCATTAT GGCTGGTTTT 
TTGGTCATGT GGGTTGATAG TAGGTGGCCA GATATTGTGA TTGGGCTAAT TATTTCTTTT 
GTTATTTTGC GGGGCGCTAA ACTTATTCTT GCAGATGCTA AAGCTGAATT GAAAGCTTCA 
GATCAAAAGA AAACCGAACA ATACCACTGA
 
Protein sequence
MSDCGCEIEI KDQSQKKVLY WLLLINFSMF ILEVTVGWVA ESTALIADSL DMLADAMVYI 
IGLYAVGKAM QKKAHAAIIS GYFQAMLGGL ILIDIVRRIV VGSEPVSELM LLIGAIALVA 
NIVCLLLIQK HKDGEVHMRA SWIFSANDVI ANVGVIMAGF LVMWVDSRWP DIVIGLIISF 
VILRGAKLIL ADAKAELKAS DQKKTEQYH